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. 2014 Jun 23;9(6):e99706. doi: 10.1371/journal.pone.0099706

Figure 4. The most significant network determined in IPA.

Figure 4

The network was generated in IPA using triangle connectivity based on focus genes (30 from our differentially regulated data set) and built up according to the number of interactions between a single prospective gene and others in the existing network, and the number of interactions the prospective gene has outside this network with other genes as determined by IPA [43]. Network score = 52, equivalent to −log P value of Fisher's exact t-Test. Interactions between molecules, and the degree and direction of regulation are indicated with up (red) or down regulation (green) and increasing color intensity with degree of fold change.