TABLE 1 .
Summary information on assembled genomesa
| Genome name | Sample | Genome size (bp) | % GC | Avg coverage (no. of reads) | No. of ORFs | ORF 1 size (bp) | ORF 1 size (aa) | ORF 2 size (bp) | ORF 2 size (aa) | 5′ UTR size (bp) | IGR size (bp) | 3′ UTR size (bp) | % UTR | Poly(A) tail | % of totalb |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KB2010_con16 | 2010 | 9,465 | 38.9 | 529 | 2 | 5,388 | 1,796 | 2,718 | 906 | 773 | 296 | 289 | 14.3 | Y | 13 |
| KB2009_con55 | 2009 | 9,104 | 38.7 | 115 | 2 | 5,388 | 1,796 | 2,718 | 906 | 773 | 296 | 289 | 14.9 | Y | 2 |
| KB2009_con15 | 2009 | 9,387 | 46.8 | 169 | 1 | 8,481 | 2,827 | NA | NA | 585 | NA | 298 | 9.4 | Y | 3 |
| KB2009_con28 | 2009 | 9,264 | 45.3 | 259 | 1 | 8,268 | 2,756 | NA | NA | 904 | NA | 161 | 11.5 | ND | 5 |
| KB2009_con74 | 2009 | 8,500 | 42.6 | 131 | 2 | 5,415 | 1,805 | 2,718 | 906 | 61 | 259 | 47 | 4.3 | ND | 2 |
| KB2009_con88 | 2009 | 8,330 | 36.4 | 81 | 1 | 8,127 | 2,709 | NA | NA | 28 | NA | 138 | 2.0 | Y | 1 |
a
Estimated minimum genome size, % GC content, average coverage, the sizes of open reading frames (ORFs) and untranslated regions (UTRs), and whether a poly(A) tail was evident are presented for each of the six genomes assembled from the metagenomic libraries. IGR, intergenic region; NA, not available; ND, not detected; Y, yes.
b
Listed in this column are the percentages of total bp assigned to a genome calculated by multiplying the predicted size of the genome (in bp) by the average genome coverage value and dividing by the total no. of bp generated in the library (×100).