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. 2014 Jun 17;5(3):e01210-14. doi: 10.1128/mBio.01210-14

TABLE 1 .

Summary information on assembled genomesa

Genome name Sample Genome size (bp) % GC Avg coverage (no. of reads) No. of ORFs ORF 1 size (bp) ORF 1 size (aa) ORF 2 size (bp) ORF 2 size (aa) 5′ UTR size (bp) IGR size (bp) 3′ UTR size (bp) % UTR Poly(A) tail % of totalb
KB2010_con16 2010 9,465 38.9 529 2 5,388 1,796 2,718 906 773 296 289 14.3 Y 13
KB2009_con55 2009 9,104 38.7 115 2 5,388 1,796 2,718 906 773 296 289 14.9 Y 2
KB2009_con15 2009 9,387 46.8 169 1 8,481 2,827 NA NA 585 NA 298 9.4 Y 3
KB2009_con28 2009 9,264 45.3 259 1 8,268 2,756 NA NA 904 NA 161 11.5 ND 5
KB2009_con74 2009 8,500 42.6 131 2 5,415 1,805 2,718 906 61 259 47 4.3 ND 2
KB2009_con88 2009 8,330 36.4 81 1 8,127 2,709 NA NA 28 NA 138 2.0 Y 1
a

Estimated minimum genome size, % GC content, average coverage, the sizes of open reading frames (ORFs) and untranslated regions (UTRs), and whether a poly(A) tail was evident are presented for each of the six genomes assembled from the metagenomic libraries. IGR, intergenic region; NA, not available; ND, not detected; Y, yes.

b

Listed in this column are the percentages of total bp assigned to a genome calculated by multiplying the predicted size of the genome (in bp) by the average genome coverage value and dividing by the total no. of bp generated in the library (×100).