TABLE 2.
Ofloxacin MIC | Study no. | Mutation by Sanger sequencing | Proportion of heteroresistance at: |
Total | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Rv0005 site (mutation) |
Rv0006 site (mutation) |
|||||||||
1613 T (N538I) | 1616 A (T539N) | 269 T (A90V) | 271 C (S91P) | 280 A (D94N) | 280T (D94Y) | 281 G (D95G) | ||||
1 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 19 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
1 | 25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
4 | 29 | 0 | 0.23b | 0.09 | 0.22 | 0 | 0 | 0.45 | 0.99 | |
8 | 2 | A90V | 0 | 0 | 0.84 | 0 | 0 | 0 | 0 | 0.84 |
8 | 28 | D94N | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
8 | 45 | 0 | 0 | 0 | 0 | 0 | 0 | 0.09 | 0.09 | |
16 | 38 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
64 | 1 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
64 | 6 | D94G/D94N | 0 | 0 | 0 | 0 | 0.49 | 0 | 0.5 | 0.99 |
64 | 7 | D94Y | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
64 | 8 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
64 | 11 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
64 | 12 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 0.48 | 0.48 |
64 | 13 | D94Y | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
64 | 14 | S91P | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
64 | 40 | 0 | 0 | 0.01 | 0 | 0 | 0 | 0 | 0.01 | |
64 | 41 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 0.37 | 0.37 |
64 | 44 | N538I | 0.98 | 0 | 0 | 0 | 0 | 0 | 0 | 0.98 |
128 | 9 | D94N | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
128 | 27 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
128 | 36 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0 | 0.01 | |
256 | 4 | D94G/D94N | 0 | 0 | 0 | 0 | 0.82 | 0 | 0.17 | 0.99 |
256 | 5 | D94G/D94N | 0 | 0 | 0 | 0 | 0.28 | 0 | 0.19 | 0.47 |
256 | 10 | D94G | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
256 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
256 | 35 | 0 | 0 | 0.19 | 0 | 0 | 0 | 0.01 | 0.2 | |
256 | 37 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
256 | 42 | 0 | 0 | 0 | 0 | 0 | 0 | 0.04 | 0.04 |
Isolates are sorted by MIC and then by sample number. The proportion of heteroresistance was <1% in samples 36 and 40.
Heteroresistant positions are shown in bold type.