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M. tuberculosis strain lineages identified among 497 isolates in Kampala
| Strain lineage | No. (%) |
|---|---|
| T2 | 85 (17.1) |
| T2-Uganda | 142 (28.6) |
| T1 | 36 (7.3) |
| CAS | 17 (3.4) |
| CAS1_Delhi | 17 (3.4) |
| CAS1_Kili | 15 (3.0) |
| LAM11_ZWE | 12 (2.4) |
| LAM3/S convergent | 11 (2.2) |
| S | 9 (1.8) |
| LAM9 | 8 (1.6) |
| H3 | 7 (1.4) |
| T2T3 | 4 (0.8) |
| T2_Eth | 4 (0.8) |
| Undesignated | 5 (1.0) |
| CAS2 | 1 (0.2) |
| EAI5 | 4 (0.4) |
| Beijing | 2 (0.4) |
| LAM4 | 2 (0.4) |
| H4 | 2 (0.4) |
| MANU1 | 2 (0.4) |
| MANU2 | 3 (0.6) |
| LAM6 | 1 (0.2) |
| EA1ND | 1 (0.2) |
| Unknown | 107 (21.5) |
