TABLE 3.
AWRI 1499 CDS accession no. | CBS 2499 JGI transcript identifier | AWRI 1499 contig GenBank accession no. | CBS 2499 scaffold (JGI name) | Functionb | GenBank homology (BLASTX)c |
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---|---|---|---|---|---|---|---|---|
Organism (GenBank accession no.) | % identity | E valued | S scoree | |||||
EIF46399 | 8711 | AHIQ01000211 | Scaffold 18 | Pantothenate transporter Fen2 | Meyerozyma guilliermondii ATCC 6260 (XP_001482616) | 63.34 | 0.0 | 1,538 |
EIF46400 | 23063 | AHIQ01000211 | Scaffold 18 | Upf0145 protein | Streptomyces sp. R1-NS-10 (WP_019070227) | 55.66 | 4e−34 | 316 |
EIF45404 | 26687 | AHIQ01000280 | Scaffold 17 | MFS drug transporter | Meyerozyma guilliermondii ATCC 6260 (XP_001482160) | 55.11 | 2e−177 | 1,342 |
EIF45405 | 51428 | AHIQ01000280 | Scaffold 17 | Putative MFS-MDR transporter | Ogataea parapolymorpha DL-1 (EFW97434) | 45.75 | 6e−137 | 1,073 |
EIF45407 | 62814 | AHIQ01000280 | Scaffold 17 | High-affinity glucose transporter | Scheffersomyces stipitis CBS 6054 (XP_01382755) | 71.38 | 0.0 | 2,037 |
EIF45408 | 26690 | AHIQ01000280 | Scaffold 17 | Galactose-1-phosphate uridylyltransferase | Scheffersomyces stipitis CBS 6054 (XP_001383359) | 65.94 | 8e−179 | 1,322 |
EIF45409 | 8686 | AHIQ01000280 | Scaffold 17 | Galactokinase | Meyerozyma guilliermondii ATCC 6260 (EDK41764) | 54.07 | 3e−152 | 1,164 |
EIF45410 | 26691 | AHIQ01000280 | Scaffold 17 | GAL10 bifunctional protein | Candida tenuis ATCC 10573 (EGV61616) | 58.08 | 0.0 | 2,080 |
EIF45411 | 26692 | AHIQ01000280 | Scaffold 17 | dTDP-glucose dehydratase | Debaryomyces hansenii CBS767 (XP_457784) | 49.02 | 8e−99 | 787 |
EIF45412 | 78562 | AHIQ01000280 | Scaffold 17 | Hexose transporter | Candida intermedia (CAO79523) | 47.73 | 6e−144 | 1,118 |
EIF45413 | 8690 | AHIQ01000280 | Scaffold 17 | Maltase | Saccharomyces kudriavzevii IFO 1802 (EJT44539) | 63.4 | 0.0 | 1,954 |
EIF45414 | 36189 | AHIQ01000280 | Scaffold 17 | Multidrug resistance regulator 1 | Ogataea parapolymorpha DL-1 (EFW97551) | 34.62 | 4e−61 | 584 |
EIF45415 | 51487 | AHIQ01000280 | Scaffold 17 | β-Glucosidase | Schwanniomyces etchellsii (ACF93471) | 59.26 | 0.0 | 2,706 |
EIF45416 | 51392 | AHIQ01000280 | Scaffold 17 | Hexose transporter | Wickerhamomyces ciferrii (CCH41021) | 50.36 | 0.0 | 1,439 |
EIF45248 | 26813 | AHIQ01000303 | Scaffold 24 | β-Galactosidase | Kluyveromyces lactis NRRL Y-1140 (XP_452194) | 58.39 | 0.0 | 1,575 |
EIF45249 | 51850 | AHIQ01000303 | Scaffold 24 | Nitrate reductase | Ogataea parapolymorpha DL-1 (EFW95688) | 59.32 | 0.0 | 2,067 |
EIF45250 | 26815 | AHIQ01000303 | Scaffold 24 | Nitrite reductase | Ogataea parapolymorpha DL-1 (EFW95689) | 62 | 0.0 | 1,159 |
EIF45251 | 145655 | AHIQ01000303 | Scaffold 24 | Nitrate transporter | Ogataea parapolymorpha DL-1 (EFW95690) | 59 | 0.0 | 604 |
EIF45193 | 8788 | AHIQ01000316 | Scaffold 20 | Cytochrome mitochondrial precursor | Spathaspora passalidarum NRRL Y-27907 (EGW32589) | 50.68 | 2e−113 | 904 |
EIF45194 | 31164 | AHIQ01000316 | Scaffold 20 | Fungus-specific transcription factor domain protein | Kluyveromyces lactis NRRL Y-1140 (XP_453742) | 45.55 | 7e−97 | 876 |
As determined by read depth analysis (CNVnator) and/or BLAST analysis of the AWRI 1499 and CBS 2499 genome sequence against the ST05.12/22 genome assembly and confirmed by a PCR screen (see also Data Sets S5 and S6 in the supplemental material).
Based on the best B. bruxellensis GenBank BLASTX hit.
B. bruxellensis hits excluded.
E value, expected value.
Bit score calculated by the BLAST algorithm.