. 2014 Jun 12;8:135–145. doi: 10.4137/BBI.S14631

Table 2.

Homology of target site sequence across segment 2 of 63 HPAIV (H5N1) isolates from different avian species in 24 different countries, reported between years 1970 and 2012. ”+” indicates 100% homology of target sequence.

ACC. NO.	HOST SPECIES	COUNTRY	YEAR	CHICKEN miRNAs (LOCATION OF TARGET SITE WITH REFERENCE TO CY092122)
ACC. NO.	HOST SPECIES	COUNTRY	YEAR	gga-miR-1671(505 to 527)	gga-miR-3526(1653 to 1671)	gga-miR-1803(2042 to 2062)	gga-miR-1670(1261 to 1282)	gga-miR-1553(2253 to 2274)	gga-miR-1628(2264 to 2285)	gga-miR-1692(657 to 676)	gga-miR-1593(1050 to 1070)	gga-miR-1593(1786 to 1806)	gga-miR-1629(475 to 495)	gga-miR-27b(796 to 816)	gga-miR-30a-3p(1735 to 1756)	gga-miR-92(1883 to 1903)	gga-miR-133c(1792 to 1813)	gga-miR-137(279 to 300)	gga-miR-146c*(126 to 147)	gga-miR-194(1587 to 1608)	gga-miR-204(582 to 603)	gga-miR-211(582 to 603)	gga-miR-367(1883 to 1903)	gga-miR-1561(738 to 758)	gga-miR-1632(1385 to 1407)	gga-miR-1662(14 to 35)	gga-miR-1710(1784 to 1805)
CY092122	Chicken	India	2011	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
CY015087	Chicken	United Kingdom	1959	+	+			+	+			+					+	+	+					+	+	+	+
GU052524	Chicken	United Kingdom	1959	+	+			+	+			+					+	+	+					+	+	+	+
GU052009	Mallard	USA	1975	+	+			+	+			+			+		+	+	+		+			+	+	+	+
EU871818	Turkey	Canada	1983	+	+				+	+		+			+		+	+			+			+	+	+	+
CY015125	Turkey	United Kingdom	1991	+	+			+	+	+		+		+		+	+	+	+		+	+	+	+	+	+	+
AF144301	Goose	China	1996	+	+			+	+	+	+	+		+	+	+	+	+	+	+	+			+		+	+
GU052478	Avian	Italy	1997	+	+			+	+	+		+		+	+		+	+	+		+	+		+	+	+	+
DQ997120	Chicken	China	1997	+				+	+					+	+	+	+	+	+						+	+
GU052484	Duck	Hong Kong	1998	+	+			+	+	+		+		+	+	+	+	+	+		+	+	+	+	+	+	+
AY585492	Duck	China	1999	+	+			+	+	+		+		+	+	+	+		+	+	+			+	+		+
GU052025	Goose	Hong Kong	1999	+	+	+		+	+	+	+	+		+	+	+	+	+	+	+	+			+	+	+	+
AY585486	Duck	China	2000	+		+		+		+	+	+		+	+	+		+	+			+		+	+	+	+
GU052055	Goose	Hong Kong	2000	+	+	+	+	+	+	+	+	+		+	+	+		+	+	+	+			+	+	+	+
GU051307	Mallard	USA	2000	+	+	+		+	+			+			+		+	+	+		+			+	+	+	+
DQ351874	Chicken	China	2001	+			+	+	+	+		+		+		+	+	+	+	+	+		+	+	+	+	+
GU186690	Duck	Hong Kong	2001	+	+			+	+	+	+	+		+	+	+	+	+	+	+	+			+	+	+	+
GU052111	Goose	Viet Nam	2001	+	+	+	+	+	+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
DQ997084	Chicken	China	2002	+		+		+	+	+		+		+	+	+	+	+	+					+	+	+	+
GU052463	Goose	Hong Kong	2002	+	+	+	+	+	+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
GU052416	Chicken	Indonesia	2003	+	+	+	+	+	+	+	+	+		+	+	+	+	+	+	+	+			+	+	+	+
AY676027	Chicken	South Korea	2003	+	+	+	+	+	+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
AB212278	Duck	Japan	2003	+	+	+	+		+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
GQ122443	Chicken	Indonesia	2004		+	+	+	+	+	+	+	+		+	+	+	+	+	+	+	+			+	+	+	+
GU052455	Magpie	South Korea	2004	+	+	+	+	+	+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
GU186791	Wild Duck	USA	2004					+	+			+	+		+		+	+	+			+			+	+	+
EU147291	Avian	Russia	2005	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
CY095583	Mallard	Italy	2005	+	+			+	+	+		+		+		+	+		+		+	+		+		+	+
EF517399	Mallard	Canada	2005	+	+	+		+	+						+		+	+	+		+	+		+	+	+
AB450529	Pigeon	Thailand	2005	+	+	+	+	+		+		+		+	+	+	+	+	+	+	+			+	+	+	+
DQ914811	Chicken	China	2006	+	+	+	+	+	+	+		+		+	+	+	+	+	+	+	+			+	+	+	+
DQ464361	Swan	Germany	2006	+	+	+		+	+	+		+		+	+	+	+	+	+					+	+	+	+
EF362424	Chicken	India	2006	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
HM006749	Chicken	Laos	2006	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
AM262525	Chicken	Nigeria	2006	+	+	+		+	+	+		+		+	+	+	+	+	+					+	+	+	+
GU182140	Chicken	China	2007	+	+	+	+	+	+	+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
AM914009	Bl.nest-ed Grebe	Germany	2007	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
FM163438	Chicken	Poland	2007	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
GU186515	Turkey	USA	2007		+			+	+			+	+		+			+	+		+			+	+	+	+
CY029946	Chicken	Kuwait	2007	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
GU727667	Duck	China	2008	+	+		+	+	+	+	+	+		+		+	+	+	+	+	+			+	+	+	+
GU066386	Chicken	India	2008	+	+	+		+	+	+		+		+	+	+		+	+	+				+	+	+	+
EU574925	Chicken	Israel	2008	+	+			+	+			+		+	+	+	+	+	+	+				+	+	+	+
FJ966208	Crow	India	2008	+	+	+		+	+	+		+		+	+	+	+	+		+				+	+	+	+
CY040988	Chicken	Laos	2008	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
GQ386155	Bean Goose	Russia	2009	+	+	+	+	+		+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
JN588914	Chicken	Combodia	2009	+	+	+	+	+				+			+	+	+	+	+	+	+			+	+	+	+
GU083651	Chicken	India	2009	+	+	+		+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
CY097356	Mallard	USA	2009		+			+	+			+	+		+		+	+	+					+		+	+
AB520706	Whoop-er Swan	Mangolia	2009	+	+	+	+	+		+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
JF510045	Wild Duck	South Korea	2009	+	+			+	+	+		+		+	+	+	+	+	+		+	+			+	+	+
CY063479	Chicken	Bhutan	2010	+	+			+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
CY061292	Chicken	India	2010	+	+	+		+	+	+		+		+		+	+	+	+	+			+	+	+	+	+
HQ156774	Chicken	Bangladesh	2010	+	+			+	+	+		+		+	+	+	+	+	+	+				+	+	+	+
JQ936701	Chicken	Myanmar	2010	+	+	+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
JN807933	Duck	South Korea	2010	+	+	+	+	+		+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
AB684220	Chicken	Japan	2011	+	+	+	+	+		+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
CY092116	Chicken	India	2011	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
JQ701718	Duck	Combodia	2011	+	+	+		+				+		+		+	+	+	+	+	+			+	+	+	+
JN646699	Duck	China	2011	+	+	+	+	+	+	+		+	+	+	+	+	+	+	+	+			+		+	+	+
AB636522	Muscovy Duck	Viet Nam	2011	+	+	+	+	+				+			+	+	+	+	+	+	+			+	+	+	+
JN807930	Quail	South Korea	2011	+	+	+	+	+		+		+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
AB742261	Duck	Viet Nam	2012	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+