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. 2014 Jun 24;9(6):e100946. doi: 10.1371/journal.pone.0100946

Table 3. Alignment statistics of the RNA-Seq analysis.

Summary S-SuS R-mid
Total reads 6,710,697 (100.00%) 6,224,800 (100.00%)
Total base pairs 328,824,153 (100.00%) 305,015,200 (100.00%)
Total mapped reads 5,520,945 (82.27%) 4,905,375 (78.80%)
Perfect match 3,975,169 (59.24%) 3,148,053 (50.57%)
< = 2 bp mismatch 1,545,776 (23.03%) 1,757,322 (28.23%)
Unique match 4,660,267 (69.45%) 4,233,287 (68.01%)
Multi-position match 860,678 (12.83%) 672,088 (10.80%)
Total unmapped reads 1,189,752 (17.73%) 1,319,425 (21.20%)