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. 2014 Jun 17;106(12):2729–2736. doi: 10.1016/j.bpj.2014.05.013

Table 1.

Definition of nomenclatures and abbreviations used in the text

Nomenclature and abbreviation Definition
DC component 0th order of the transformed series in FFT. It represents the summation of signals from all input pixels.

FFT Fast Fourier transformation

(Global) T-tubules The entire tubule system, including both TE and LE.

Global T-tubule regularity The magnitude of the major frequency normalized to that of the DC component, calculated from skeletalized global T-tubule system of a cell.
TTpower, previously defined as an index for T-tubule regularity in Wei et al. (15), is a measure of the magnitude of the major frequency without normalization.

PIT Pixel intensity threshold, a value used for thresholding the input image based on the intensity of pixels, to detect ROI.

ROI Region of interest, the intracellular region enclosed by the peripheral membrane.

TE density The total number of pixels of skeletalized TE divided by the total Number of pixels of intracellular area (ROI).

LE density The total number of pixels of skeletalized LE divided by the total number of pixels of intracellular area (ROI).

TE spacing The average horizontal spatial interval between TE, derived from the spatial frequency.

TTint Index of T-tubule integrity, which takes into account both regularity and density. For analysis of global T-tubules, TTint = global T-tubule density × global T-tubule regularity; for analysis of TE only, TTint = TE density × TE regularity.