Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2014 Jun 6;15(1):439. doi: 10.1186/1471-2164-15-439

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© Alexeyenko et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Assembly length achieved as a function of minimal contig size (bp) and pool complexity (number of Fosmids per pool). A: FP assembly alone. B: assembly with scaffolding. The leftmost point on each x-axis indicates the values achieved by haploid whole genome shotgun (WGS) sequencing. Solid, dashed, dotted lines: data for contigs longer than 5, 10, and 20 Kbp, respectively. Read coverage after read quality control and filtering was around 38x for the haploid WGS, and then 65x, 115x, 150x, 160, and 200x for the pools from fp5000 to fp100, respectively. The libraries used for scaffolding, 650 bp paired end and 2.4 kbp mate pairs, provided coverage around 20x and 25x, respectively.