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. 2014 Jun;4(2):250–259. doi: 10.1086/675988

Table S1.

Hardy-Weinberg equilibrium (HWE) of the single-nucleotide polymorphisms (SNPs) in the pentraxin-3 gene locus

SNP Observed genotype counts Observed allele counts Minor allele frequency, % Expected counts under HWE Exact P
rs3845978 (n = 1,585) AA = 34; AG = 306; GG = 1,245 A = 374; G = 2,796 12 AA = 22; AG = 330; GG = 1,233 .01
rs2305619 (n = 1,583) AA = 335; AG = 764; GG = 484 A = 1,434; G = 1,732 45 AA = 325; AG = 784; GG = 474 .31
rs2120243 (n = 1,580) AA = 237; AC = 740; CC = 603 A = 1,214; C = 1,946 38 AA = 233; AC = 748; CC = 599 .71
rs1456099 (n = 1,582) AA = 330; AT = 744; TT = 508 A = 1,404; T = 1,760 44 AA = 312; AT = 781; TT = 490 .06
rs9289983 (n = 1,582) AA = 311; AG = 719; GG = 554 A = 1,341; G = 1,827 42 AA = 284; AG = 773; GG = 525 .01
rs2614 (n = 1,582) AA = 5; AG = 55; GG = 1,522 A = 65; G = 3,099 2 AA = 1; AG = 64; GG = 1,518 .00