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. 2014 Jun 14;8:69. doi: 10.1186/1752-0509-8-69

Table 1.

List of ODE model parameters, their descriptions, and values

Parameter Description Value
Sa
Activator scale of action
Logarithmically sampled from [10−3, 103]
Si
Inhibitor scale of action
Logarithmically sampled from [10−4, 102]
α
Stoichiometry parameter
Linearly sampled from [0.2, 5]
β
Stoichiometry parameter
Linearly sampled from [0.2, 5]
θa
Activator production rate
300, 1500 or 7500/hr
θi
Inhibitor production rate
300, 1500 or 7500/hr
γ0
Dilution rate constant
0.46/hr
ta
Activator half-life
5, 30, 120 or ∞ min
γa
Activator degradation rate constant
ln(2)/ta
ti
Inhibitor half-life
5, 30, 120 or ∞ min
γi
Inhibitor degradation rate constant
ln(2)/ti
N
Network copy number
1 or 2
λa
Activator basal production coefficient
0.20
λi
Inhibitor basal production coefficient
0.20
g Inducer strength 10-2+0.025C, where C = 0, 1, 2, …, 80