Table 1.
Free energy change caused by SNPs
|
Segment |
SNP |
SNP with changed free energy |
SZ-SNP |
||||||
|---|---|---|---|---|---|---|---|---|---|
| Number | Range of free energy change | Average free energy change | Number | Range of free energy change | Average free energy change | Number | Range of free energy change | Average free energy change | |
| Terminal loop |
1284 |
[-6.2, 5.5] |
0.08 |
176 |
[-6.2, 0) |
-1.1 |
57 |
[-6.2,-1.3] |
-2.5 |
| Mature miRNA |
3585 |
[4.7, -3.4] |
0.56 |
2310 |
[4.7, 0) |
1.3 |
888 |
[4.7, 1.5] |
2.2 |
| Extension duplex | 4065 | [18.2, -10.9] | 0.6 | 1775 | [18.2, 0) | 2.6 | 533 | [18.2,2.7] | 6.0 |
SNPs with changed free energy are those causing decrease in free energy of terminal loops and those causing increase in free energy of mature miRNAs and extension duplexes.