Table 1. Top 25 down-regulated transcripts in low KPY samples.

Gene ID	Meunna		Florentine		TAIR gene annotation
	LogFC	FDR	LogFC	FDR
Eucgr.E01020	−2.4	7E-10	−2.0	4E-06	ABL interactor-like protein 2
Eucgr.J01011	−2.8	1E-06	−2.0	2E-05	cytochrome P450, family 77, subfamily A, polypeptide 4
Eucgr.I01292	−2.6	4E-06	−2.0	5E-06	Dehydrin family protein
Transcript_23294	−3.3	8E-10	−2.3	1E-07	delta(3), delta(2)-enoyl CoA isomerase 1
Eucgr.E04327	−4.9	2E-11	−2.0	2E-05	DNA glycosylase superfamily protein
Eucgr.F03723	−2.7	4E-06	−2.1	2E-05	expansin 11
Eucgr.E01366	−2.5	9E-08	−2.0	3E-05	FASCICLIN-like arabinogalactan protein 8
Eucgr.J00937	−3.4	2E-05	−2.4	3E-06	FASCICLIN-like arabinogalactan-protein 11
Eucgr.J00938	−3.0	1E-08	−2.2	5E-08	FASCICLIN-like arabinogalactan-protein 12
Eucgr.B02486	−3.0	8E-09	−2.1	8E-06	FASCICLIN-like arabinogalactan-protein 12
Eucgr.C00602	−2.1	2E-05	−2.0	3E-09	GATA transcription factor 12
Eucgr.K03566	−3.3	1E-09	−2.3	4E-06	GDSL-like Lipase/Acylhydrolase superfamily protein
Eucgr.B00543	−2.3	2E-05	−3.5	2E-13	Malectin/receptor-like protein kinase family protein
Eucgr.K01501	−3.3	9E-11	−2.2	5E-06	plasma-membrane associated cation-binding protein 1
Eucgr.J02930	−3.6	3E-12	−2.0	5E-05	profilin 5
Eucgr.H04207	−3.1	2E-06	−2.0	1E-05	Protein of Unknown Function (DUF239)
Eucgr.H04514	−2.9	4E-11	−2.0	1E-06	respiratory burst oxidase homolog B
Eucgr.C00771	−2.6	4E-07	−2.0	5E-07	SAUR-like auxin-responsive protein family
Eucgr.I00074	−2.7	2E-08	−2.0	2E-05	sucrose synthase 2
Eucgr.I00074	−2.7	2E-08	−2.0	2E-05	sucrose synthase 2
Eucgr.H03496	−2.8	7E-08	−2.0	9E-07	sucrose synthase 4
Eucgr.F02183	−2.1	2E-06	−2.0	7E-08	Tubulin/FtsZ family protein
Eucgr.C01361	−2.4	1E-07	−2.1	3E-05	No-Hit
Eucgr.H01054	−3.9	1E-06	−2.8	7E-10	Unknown Protein
Eucgr.H03407	−4.1	5E-08	−2.5	3E-07	Unknown Protein

E. grandis gene names are used when the predicted genes are mapped to E. grandis gene coordinates otherwise the predicted gene names are used with a prefix “Transcript”.