Table 4.
The collinearity relationship among LOX genes in the same species
| Synteny sequence1 | Chromosome | Synteny sequence2 | Chromosome |
|---|---|---|---|
| mrna20644.1 | Chr3 | mrna26944.1 | Chr7 |
| Pbr020413.1 | Chr4 | Pbr020434.1 | Chr4 |
| Pbr020415.1 | Chr4 | Pbr020432.1 | Chr4 |
| Pbr000364.1 | Chr5 | Pbr016256.1 | Chr10 |
| MDP0000279287 | Chr7 | MDP0000281525 | Chr2 |
| MDP0000272843 | Chr10 | MDP0000569022 | Chr5 |
| Pbr004541.1 | Chr11 | Pbr004568.1 | Chr11 |
| MDP0000081005 | Chr12 | MDP0000423544 | Chr4 |
| MDP0000125303 | Chr12 | MDP0000264666 | Chr4 |
| MDP0000146677 | Chr12 | MDP0000923670 | Chr4 |
| MDP0000154668 | Chr13 | MDP0000215405 | Chr16 |
| Pbr008100.1 | Chr16 | Pbr037071.1 | scaffold748.0 |
| Pbr004005.1 | scaffold1189.0 | Pbr004008.1 | scaffold1189.0 |
| Pbr004005.1 | scaffold1189.0 | Pbr035580.1 | Chr5 |
In total 14 pairs of collinear relationships were detected among the same species. 7 pairs are among pear, 6 pairs are among apple and 1 in strawberry. Pbr004005.1 on scaffold1189.0 is collinear with Pbr004008.1 and Pbr035580.1. All the 4 pairs of LOX paralogous genes in pear are included in the collinearity analysis.