Skip to main content
. 2014 Jun 11;30(12):i185–i194. doi: 10.1093/bioinformatics/btu273

Table 1.

Attenuation in gene length (base pairs) and SNP number correlations to number of GWAS associations across different P-value statistical thresholds in GRASP

−log10 (P-value) threshold r2 (autosomes) using gene length r2 (autosomes) using SNP counts r2 (autosomes + X + Y) using gene length
1.30103 0.814 0.908 0.774
2 0.661 0.716 0.631
2.30103 0.545 0.580 0.521
2.60206 0.439 0.459 0.421
3 0.353 0.364 0.339
3.12494 0.301 0.309 0.290
3.30103 0.231 0.234 0.222
3.60206 0.142 0.141 0.136
4 0.078 0.076 0.075
4.12494 0.058 0.055 0.055
4.30103 0.039 0.037 0.037
4.60206 0.020 0.020 0.019
5 0.0096 0.0086 0.0090
7.30103 0.0006 0.0007 0.0006

eQTL and mQTL and MHC 6p21.3 results are excluded.