Table 1.
−log10 (P-value) threshold | r2 (autosomes) using gene length | r2 (autosomes) using SNP counts | r2 (autosomes + X + Y) using gene length |
---|---|---|---|
1.30103 | 0.814 | 0.908 | 0.774 |
2 | 0.661 | 0.716 | 0.631 |
2.30103 | 0.545 | 0.580 | 0.521 |
2.60206 | 0.439 | 0.459 | 0.421 |
3 | 0.353 | 0.364 | 0.339 |
3.12494 | 0.301 | 0.309 | 0.290 |
3.30103 | 0.231 | 0.234 | 0.222 |
3.60206 | 0.142 | 0.141 | 0.136 |
4 | 0.078 | 0.076 | 0.075 |
4.12494 | 0.058 | 0.055 | 0.055 |
4.30103 | 0.039 | 0.037 | 0.037 |
4.60206 | 0.020 | 0.020 | 0.019 |
5 | 0.0096 | 0.0086 | 0.0090 |
7.30103 | 0.0006 | 0.0007 | 0.0006 |
eQTL and mQTL and MHC 6p21.3 results are excluded.