TABLE 3 .
Comparison and miRNA | MRC | Log fold change | P value | FDR | |
---|---|---|---|---|---|
Control versus CmVar001 | CmVar001 | Controls | |||
mmu-miR-223-3p | 78.00 | 29.73 | −1.39 | 0.0000 | 0.0003 |
mmu-miR-203-3p* | 430.87 | 121.22 | −1.83 | 0.0000 | 0.0003 |
mmu-miR-18a-5p* | 22.29 | 5.64 | −1.98 | 0.0000 | 0.0021 |
mmu-miR-215-5p | 12.51 | 0.00 | 0.0000 | 0.0000 | |
Control vs CmVar004 | CmVar004 | Controls | |||
mmu-miR-98-5p | 137.96 | 57.49 | −1.26 | 0.0000 | 0.0001 |
mmu-miR-21a-3p | 146.06 | 56.68 | −1.37 | 0.0000 | 0.0000 |
mmu-miR-155-5p | 34.77 | 8.91 | −1.96 | 0.0000 | 0.0001 |
mmu-miR-18a-5p* | 23.50 | 5.41 | −2.12 | 0.0000 | 0.0001 |
mmu-miR-223-3p* | 175.75 | 28.51 | −2.62 | 0.0000 | 0.0000 |
CmVar001 versus CmVar004 | CmVar001 | CmVar004 | |||
mmu-miR-223-3p | 61.00 | 100.00 | 1.00 | 0.0002 | 0.04 |
mmu-miR-203-3p | 300.00 | 100.00 | −2.00 | 0.0001 | 0.02 |
MRC, mean read count; FDR, false discovery rate. Cutoff of FDR < 0.05; minimum 10 reads; upper fold change = 1; *, lower fold change = −1. DEseq, differential expression levels.