TABLE 3 .

DEseq of miRNAs discovered by sequencing^a

Comparison and miRNA	MRC		Log fold change	P value	FDR
Control versus CmVar001	CmVar001	Controls
mmu-miR-223-3p	78.00	29.73	−1.39	0.0000	0.0003
mmu-miR-203-3p*	430.87	121.22	−1.83	0.0000	0.0003
mmu-miR-18a-5p*	22.29	5.64	−1.98	0.0000	0.0021
mmu-miR-215-5p	12.51	0.00		0.0000	0.0000
Control vs CmVar004	CmVar004	Controls
mmu-miR-98-5p	137.96	57.49	−1.26	0.0000	0.0001
mmu-miR-21a-3p	146.06	56.68	−1.37	0.0000	0.0000
mmu-miR-155-5p	34.77	8.91	−1.96	0.0000	0.0001
mmu-miR-18a-5p*	23.50	5.41	−2.12	0.0000	0.0001
mmu-miR-223-3p*	175.75	28.51	−2.62	0.0000	0.0000
CmVar001 versus CmVar004	CmVar001	CmVar004
mmu-miR-223-3p	61.00	100.00	1.00	0.0002	0.04
mmu-miR-203-3p	300.00	100.00	−2.00	0.0001	0.02

^aMRC, mean read count; FDR, false discovery rate. Cutoff of FDR < 0.05; minimum 10 reads; upper fold change = 1; *, lower fold change = −1. DEseq, differential expression levels.