TABLE 2 .

BLAST output of regions 1 to 6 against the database^a

BLAST targetb	% Identityc	Alignment length	No. of:		Query		Target		Accession no.
			MMd	Gaps	Start	End	Start	End
Query—CL02 region 1
B. salyersiae CL02T12C01	100.00	22,005	0	0	1,234	23,238	1,381,606	1,403,610	NZ_JH724307.1
B. cellulosilyticus CL02T12C19	100.00	22,005	0	0	1,234	23,238	5,321	27,325	NZ_JH724088.1
B. dorei CL02T12C06	99.99	17,671	1	0	7,196	24,866	530,799	548,469	NZ_JH724135.1
B. eggerthii DSM 20697	99.78	24,878	25	10	1	24,866	622,697	647,557	NZ_DS995509.1
B. plebeius DSM 17135	97.99	10,412	200	9	10,543	20,946	174,332	184,742	NZ_DS990131.1
B. fragilis 3_1_12	95.05	13,605	615	45	11,286	24,866	1,817,695	1,804,125	NZ_EQ973213.1
Query—CL02 region 2
B. dorei CL02T12C06	100.00	109,844	2	1	6,257	116,095	1,017,432	907,589	NZ_JH724134.1
B. salyersiae CL02T12C01	100.00	109,844	4	1	6,257	116,095	567,507	677,350	NZ_JH724309.1
P. johnsonii CL02T12C29	100.00	55,262	0	2	1	55,262	109,000	164,259	NZ_JH976468.1
	100.00	53,650	2	1	62,451	116,095	178,109	231,758	NZ_JH976468.1
B. cellulosilyticus CL02T12C19	100.00	59,402	2	0	1	59,042	290,506	231,465	NZ_JH724088.1
	99.99	13,339	1	0	59,002	72,340	231,364	218,026	NZ_JH724088.1
	100.00	12,303	0	0	75,233	87,535	214,881	202,579	NZ_JH724088.1
	100.00	28,560	1	0	87,536	116,095	202,478	173,919	NZ_JH724088.1
B. ovatus CL02T12C04	99.55	58,086	263	27	58,035	116,095	5,697	63,752	NZ_JH724231.1
Bacteroides sp. strain 3_2_5	98.71	33,023	426	41	2	33,010	2,030,884	2,063,856	NZ_JH636044.1
	97.79	24,597	543	9	34,628	59,221	2,065,264	2,089,854	NZ_JH636044.1
Query—CL03 region 3
B. uniformis CL03T12C37	100.00	17,607	0	0	1	17,607	96	17,702	NZ_JH724271.1
P. merdae CL03T12C32	100.00	17,607	0	0	1	17,607	142,174	159,780	NZ_JH976456.1
B. dorei CL03T12C01	100.00	17,607	0	0	1	17,607	17,607	1	NZ_JH724164.1
B. eggerthii 1_2_48FAA	98.53	17,614	245	7	1	17,607	30,388	47,994	NZ_AKBX01000010.1
B. plebeius DSM 17135	98.48	17,615	250	13	2	17,607	30,516	48,121	NZ_DS990120.2
B. intestinalis DSM 17393	98.50	16,772	236	12	2	16,766	17,245	34,007	NZ_ABJL02000003.1
Query—CL03 region 4
B. fragilis CL03T12C07	100.00	60,734	0	0	1	60,734	285,831	346,564	NZ_JH724182.1
P. distasonis CL03T12C09	100.00	60,734	0	0	1	60,734	2,432,090	2,492,823	NZ_JH976495.1
B. xylanisolvens CL03T12C04	100.00	60,734	2	0	1	60,734	2,000,696	1,939,963	NZ_JH724294.1
B. ovatus CL03T12C18	100.00	44,008	2	0	1	44,008	31,399	75,406	NZ_JH724250.1
	100.00	16,726	0	0	44,008	60,733	215,190	231,915	NZ_JH724243.1
B. fragilis NCTC 9343	99.20	38,365	289	17	22,378	60,733	2,040,415	2,078,771	NC_003228.3
	99.63	15,410	55	2	1,801	17,209	2,017,133	2,032,541	NC_003228.3
B. helcogenes P 36-108	99.60	15,423	58	3	1,801	17,221	230,238	245,659	NC_014933.1
B. uniformis ATCC 8492	95.50	16,906	652	53	30,502	47,366	215,548	198,710	NZ_DS362247.1
Query—CL03 region 5
B. xylanisolvens CL03T12C04	100.00	42,545	0	0	1	42,545	1,171,697	1,214,241	NZ_JH724294.1
B. fragilis CL03T12C07	100.00	42,545	0	0	1	42,545	457,382	414,838	NZ_JH724184.1
B. uniformis CL03T12C37	100.00	42,545	2	0	1	42,545	725,544	768,088	NZ_JH724268.1
B. ovatus CL03T12C18	100.00	28,967	1	0	13,578	42,544	205,601	176,635	NZ_JH724243.1
Bacteroides sp. strain 3_1_23	96.50	18,468	561	50	16,314	34,740	2,449,865	2,431,442	NZ_GG774949.1
B. finegoldii DSM 17565	96.60	17,611	497	57	17,192	34,740	29,060	46,630	NZ_GG688325.1
B. salyersiae DSM 18765	97.03	16,978	442	35	17,790	34,740	554,600	537,659	NZ_KB905466.1
Query—CL03 region 6
B. xylanisolvens CL03T12C04	100.00	44,124	0	0	1	44,124	388,361	344,238	NZ_JH724296.1
P. merdae CL03T12C32	100.00	26,817	0	0	1	26,817	204,214	231,030	NZ_JH976457.1
	100.00	16,701	0	0	27,424	44,124	236,576	253,276	NZ_JH976457.1
B. ovatus CL03T12C18	100.00	12,583	0	0	1	12,583	530,345	542,927	NZ_JH724241.1
	100.00	23,711	1	0	12,584	36,294	545,391	569,101	NZ_JH724241.1
B. eggerthii DSM 20697	100.00	44,124	0	0	1	44,124	159,910	204,033	NZ_DS995511.1
P. merdae CL09T00C40	100.00	44,124	0	0	1	44,124	372,514	416,637	NZ_JH976526.1
Bacteroides sp. strain 3_1_19	100.00	44,124	0	0	1	44,124	180,923	225,046	NZ_GG774763.1
Bacteroides sp. strain D22	100.00	44,124	0	0	1	44,124	56,078	100,201	NZ_GG774819.1
Alistipes sp. strain HGB5	100.00	44,124	0	0	1	44,124	66,384	110,507	NZ_AENZ01000040.1
Alistipes onderdonkii DSM 19147	100.00	44,124	1	0	1	44,124	55,386	11,263	NZ_KB894552.1
B. intestinalis DSM 17393	100.00	44,124	0	1	1	44,124	456,857	412,735	NZ_ABJL02000006.1
B. stercoris ATCC 43183	100.00	44,124	2	0	1	44,124	103,168	59,045	NZ_DS499672.1
P. merdae ATCC 43184	100.00	44,124	1	1	1	44,124	73,390	117,512	NZ_DS264518.1
B. fragilis YCH46 DNA	100.00	44,124	1	1	1	44,124	163,822	119,700	NC_006347.1

^aAll variant IS and RE were removed from query sequences. Boldface indicates strains from a natural ecosystem.

^bAll species belong to Bacteroides or Parabacteroides, unless otherwise indicated.

^c% Identity was rounded to the closest hundredth of a percent.

^dMM, mismatches.