TABLE 3 .
BLAST output of three unique regions from the mock communities against the databasea
| BLAST query (accession no.:position), targetb | % Identityc | Alignment length | No. of: |
Query |
Target |
Accession no. | |||
|---|---|---|---|---|---|---|---|---|---|
| MMd | Gaps | Start | End | Start | End | ||||
| Query—B. stercoris ATCC 43183 (NZ_DS499676.1:176961–207558) | |||||||||
| B. stercoris ATCC 43183 | 100.00 | 30,598 | 0 | 0 | 1 | 30,598 | 176,961 | 207,558 | NZ_DS499676.1 |
| B. vulgatus PC510 | 99.96 | 30,599 | 10 | 2 | 1 | 30,598 | 30,597 | 1 | NZ_ADKO01000036.1 |
| B. uniformis ATCC 8492 | 99.95 | 30,602 | 9 | 3 | 1 | 30,598 | 176,746 | 207,345 | NZ_DS362245.1 |
| B. cellulosilyticus CL02T12C19 | 99.80 | 13,767 | 23 | 3 | 1 | 13,764 | 624,314 | 610,549 | NZ_JH724089.1 |
| B. vulgatus ATCC 8482 | 99.66 | 25,496 | 76 | 10 | 1 | 25,491 | 2,046,625 | 2,021,136 | NC_009614.1 |
| P. merdae ATCC 43184 | 99.61 | 25,500 | 83 | 12 | 1 | 25,491 | 117,639 | 92,147 | NZ_DS264524.1 |
| Query—B. fragilis HMW 616 (NZ_JH815527.1:1–13248) | |||||||||
| B. fragilis HMW 616 | 100.00 | 13,248 | 0 | 0 | 1 | 13,248 | 1 | 13,248 | NZ_JH815527.1 |
| 100.00 | 13,248 | 0 | 0 | 1 | 13,248 | 80,750 | 67,503 | NZ_JH815526.1 | |
| P. merdae ATCC 43184 | 99.99 | 13,248 | 1 | 0 | 1 | 13,248 | 356,073 | 342,826 | NZ_DS264540.1 |
| Bacteroides sp. strain 4_3_47FAA | 99.99 | 13,248 | 1 | 0 | 1 | 13,248 | 561,549 | 548,302 | NZ_JH114362.1 |
| B. coprocola DSM 17136 | 89.09 | 8,440 | 800 | 87 | 4,875 | 13,248 | 8,644 | 17,028 | NZ_DS981488.1 |
| B. plebeius DSM 17135 | 89.09 | 8,440 | 800 | 87 | 4,875 | 13,248 | 241,574 | 249,958 | NZ_DS990119.1 |
| B. finegoldii CL09T03C10 | 86.88 | 5,349 | 638 | 46 | 7,935 | 13,248 | 82,421 | 77,102 | NZ_JH951901.1 |
| Query—B. faecis MAJ27 (NZ_AGDG01000049.1:1–12502) | |||||||||
| B. faecis MAJ27 | 100.00 | 12,502 | 0 | 0 | 1 | 12,502 | 1 | 12,502 | NZ_AGDG01000049.1 |
| B. plebeius DSM 17135 | 99.98 | 12,502 | 2 | 0 | 1 | 12,502 | 28,019 | 15,518 | NZ_DS990120.2 |
| B. intestinalis DSM 17393 | 99.98 | 12,502 | 2 | 1 | 1 | 12,502 | 14,748 | 2,248 | NZ_ABJL02000003.1 |
| Bacteroides sp. strain D22 | 99.87 | 12,502 | 0 | 4 | 1 | 12,502 | 35,210 | 22,725 | NZ_GG774809.1 |
| P. merdae CL03T12C32 | 98.71 | 8,731 | 112 | 1 | 603 | 9,333 | 139,124 | 130,395 | NZ_JH976456.1 |
| Bacteroides sp. strain 9_1_42FAA | 98.67 | 9,241 | 120 | 1 | 2,512 | 11,752 | 25,552 | 34,789 | NZ_EQ973174.1 |
a
Boldface indicates strains from a natural ecosystem.
b
All species belong to Bacteroides or Parabacteroides.
c
% Identity was rounded to the closest hundredth of a percent.
d
MM, mismatches.