Table 3.
LncRNAs that were downregulated by at 10-fold in urothelial carcinoma of the bladder
| Sequence Name | Gene Name | Chrom. | FCAbsolute | Probe Name |
|---|---|---|---|---|
| nc-HOXB9-206- | nc-HOXB9-206 | chr17 | 272.16144 | ASHG19A3H0000077 |
| ENST00000426074 | RP11-160A10.2 | chr6 | 52.299904 | ASHG19A3A032028 |
| nc-HOXA11-86+ | nc-HOXA11-86 | chr7 | 37.83364 | CUST_4_PI426075208 |
| AL109700 | / | chr15 | 36.111774 | ASHG19A3A052515 |
| AK123324 | / | chr8 | 28.818373 | ASHG19A3A035994 |
| nc-HOXD10-7- | nc-HOXD10-7 | chr2 | 28.742731 | ASHG19A3H0000169 |
| BC042023 | / | chr1 | 27.417946 | ASHG19A3A047528 |
| AK026384 | / | chr2 | 26.26481 | ASHG19A3A016486 |
| nc-HOXB9-205- | nc-HOXB9-205 | chr17 | 25.701212 | ASHG19A3H0000076 |
| ENST00000421606 | CES4 | chr16 | 24.578844 | ASHG19A3A054608 |
| nc-HOXD12-3- | nc-HOXD12-3 | chr2 | 21.637152 | ASHG19A3H0000174 |
| uc002tjx.3 | AY343891 | chr2 | 20.35203 | ASHG19A3A014229 |
| ENST00000416700 | RP11-58A12.3 | chr9 | 17.737352 | ASHG19A3A038722 |
| AL109696 | / | chr15 | 15.587008 | ASHG19A3A052517 |
| uc010 mam.2 | AF131817 | chr8 | 15.372687 | ASHG19A3A035947 |
| uc003tcg.2 | AK124304 | chr7 | 15.336274 | ASHG19A3A034154 |
| ENST00000442797 | AC007064.21 | chr22 | 15.284027 | ASHG19A3A020031 |
| AL390167 | / | chr13 | 14.648443 | ASHG19A3A049319 |
| ENST00000514910 | RP11-451F20.1 | chr4 | 14.038315 | ASHG19A3A026355 |
| uc003xjb.2 | BC034319 | chr8 | 13.934998 | ASHG19A3A036526 |
| CF129145 | lincRNA-LOC100506581-1 | chr16 | 13.665986 | ASHG19A3 L0000894 |
| uc001awc.1 | AK055853 | chr1 | 13.640614 | ASHG19A3A012055 |
| AK125472 | / | chr13 | 13.590306 | ASHG19A3A049853 |
| uc001 gla.1 | CR621436 | chr1 | 12.739795 | ASHG19A3A035511 |
| uc004ags.1 | AK130904 | chr9 | 12.102253 | ASHG19A3A038744 |
| AF087976 | / | chr3 | 11.665831 | ASHG19A3A022767 |
| G65639 | chr5 | 10.440295 | ASHG19A3A026776 | |
| AK307235 | lincRNA-SRD5A2 | chr2 | 10.403127 | ASHG19A3 L0001181 |
| ENST00000439715 | RP11-282E4.1 | chr9 | 10.397835 | ASHG19A3A038699 |
| ENST00000434499 | RP11-145A3.4 | chr1 | 10.215157 | ASHG19A3A040793 |