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. 2014 Jun 27;9(6):e101158. doi: 10.1371/journal.pone.0101158

Figure 2. Phylogeny of PS2SAF showing chlorarachniophyte proteins closely related to algal plastid-containing eukaryote homologues.

Figure 2

The trees were inferred using the RaxML method with the WAG+I+gamma model. Numbers at branches represent support values (bootstrap values ≥50% or posterior probability ≥0.95) from RaxML/PhyloBayes. Thick branches represent RaxML and PhyloBayes support values of 100% and 1.00, respectively. Colors of taxa: dark blue-Cyanobacteria; navy blue-Glaucophyta; green-Chloroplastida; red-Rhodophyceae; pink-Cryptophyta; yellow-Haptophyta; baby pink-Alveolata; orange-stramenopiles; brown-Chlorarachniophyta. (A) Lacking alveolate OTUs. (B) Containing alveolate OTUs.