Table 4.
Selected Loci With Strong and Moderate Correlation of Gene Expression and DNA Methylation
| Illumina Probe ID | Affymetrix Identification | Gene Symbol | Gene Name | CpG Island | Spearman ρ |
|---|---|---|---|---|---|
| ESE vs PE | |||||
| cg11719784 | 216220_s_at | ADORA1 | Adenosine A1 receptor | No | −0.433 |
| cg12728032 | 220625_s_at | ELF5 | E74-like factor 5 | Yes | 0.300 |
| cg17901463 | 215333_x_at | GSTM1 | Glutathione S-transferase μ 1 | Yes | −0.367 |
| cg09879869 | 236004_at | MUDENG | Adaptor-related protein complex 5, μ 1 subunit | No | −0.700 |
| cg17568996 | 230322_at | NFAM1 | NFAT activating protein with ITAM motif 1 | No | −0.533 |
| cg03958979 | 207443_at | NR2E1 | Nuclear receptor subfamily 2, group E, member 1 | Yes | −0.317 |
| cg12626411 | 206007_at | PRG4 | Proteoglycan 4 | No | −0.483 |
| cg03171924 | 234928_x_at | RUNX3 | Runt-related transcription factor 3 | Yes | −0.417 |
| cg01009664 | 206622_at | TRH | Thyrotropin-releasing hormone | Yes | −0.400 |
| cg05790038 | 1555291_at | TRPV3 | Transient receptor potential cation channel, subfamily V, member 3 | No | −0.500 |
| cg00186701 | 213122_at | TSPYL5 | TSPY-like 5 | Yes | −0.667 |
| MSE vs PE | |||||
| cg11719784 | 205481_at | ADORA1 | Adenosine A1 receptor | No | 0.627 |
| cg00629217 | 223611_s_at | LNX1 | Ligand of numb-protein × 1, E3 ubiquitin protein ligase | No | 0.500 |
| cg08477744 | 203417_at | MFAP2 | Microfibrillar-associated protein 2 | No | −0.700 |
| cg12493906 | 220541_at | MMP26 | Matrix metallopeptidase 26 | No | −0.745 |
| cg24512973 | 207847_s_at | MUC1 | Mucin 1, cell surface associated | Yes | −0.655 |
| cg17568996 | 243099_at | NFAM1 | NFAT activating protein with ITAM motif 1 | No | −0.527 |
| cg00035347 | 236703_at | NT5C2 | 5′-nucleotidase, cytosolic II | No | −0.791 |
| cg03171924 | 234928_x_at | RUNX3 | Runt-related transcription factor 3 | Yes | −0.455 |
| cg21296602 | 222728_s_at | TAF1D | TATA box binding protein (TBP)-associated factor, RNA polymerase I, D | No | −0.545 |
| cg06194808 | 235817_at | TMEM184A | Transmembrane protein 184A | No | −0.818 |
| cg25569462 | 1552580_at | TRIML2 | Tripartite motif family-like 2 | No | −0.609 |
| cg05790038 | 1555291_at | TRPV3 | Transient receptor potential cation channel, subfamily V, member 3 | No | −0.327 |
| MSE vs ESE | |||||
| cg25598083 | 202982_s_at | ACOT2 | Acyl-CoA thioesterase 2 | No | −0.714 |
| cg05130485 | 207686_s_at | CASP8 | Caspase 8, apoptosis-related cysteine peptidase | No | 0.500 |
| cg13181019 | 238778_at | MPP7 | Membrane protein, palmitoylated7 (MAGUK p55 subfamily member 7) | No | −0.333 |
| cg27371741 | 206286_s_at | TDGF1 | Teratocarcinoma-derived growth factor 1 | Yes | −0.452 |