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. Author manuscript; available in PMC: 2014 Jun 30.
Published in final edited form as: Cell Host Microbe. 2014 Jan 15;15(1):84–94. doi: 10.1016/j.chom.2013.12.002

Figure 1.

Figure 1

Starting network structures of regression models for (A) the JA sector and (B) the immunity against Pto as examples. Our model consists of four layers, listed from the top: (1) three MAMP treatment inputs (flg22 (red), elf18 (green), and chitosan (blue)); (2) activities of four signaling sectors at 3 hpt (yellow nodes); (3) activities of the signaling sectors at 9 hpt (orange nodes); and (4) two immunity outputs (against Pto and Pma strains, pto gray node shown). Each link represents a directional dependency between an explanatory variable “source” node and a response “target” node. Gray and black links in (A) represent the models for 3 and 9 hpt, respectively. See also Figure S1.