Table 5. Results of previously reported SNPs that were successfully genotyped or imputed in our analysis.

						NXC-GWAS
CHR	Gene†	SNP	Reported allele	Reported OR	Reference	F A	F U	OR	p
1q25.3	LAMC1	rs10911251	A	1.09	[10]	0.570	0.553	1.07	0.4898
1q41	DUSP10	rs6691170	G	0.94	[6]	0.626	0.647	0.91	0.2945
1q41	DUSP10	rs6687758	A	0.92	[6]	0.797	0.817	0.88	0.2157
2q32.3	OBFC2A	rs11903757	C	1.16	[10]	0.142	0.139	1.02	0.8047
3q26.2	MYNN	rs10936599	C	1.08	[6]	0.821	0.786	1.25	0.0386
8q23.3	EIF3H	rs16892766	A	0.92	[14]	0.905	0.926	0.75	0.0575
8q24	DQ515899	rs10505477 *	A	1.17	[15]	0.571	0.508	1.28	0.0019
8q24.21	DQ515899	rs6983267	G	1.21	[12]	0.571	0.508	1.28	0.0019
9p24	UHRF2	rs719725	A	1.07	[15]	0.598	0.605	0.97	0.7259
10p14	BC031880	rs10795668	A	0.89	[14]	0.304	0.299	1.02	0.7826
11q13.4	POLD3	rs3824999	G	1.08	[5]	0.534	0.487	1.20	0.0242
11q23	LOC120376	rs3802842	A	0.90	[11]	0.702	0.709	0.96	0.6972
12q13.13	LARP4	rs7136702	C	0.94	[6]	0.612	0.647	0.85	0.0713
14q22.2	BMP4	rs4444235	C	1.09	[7]	0.539	0.493	1.20	0.0435
15q13.3	SCG5	rs16969681	C	0.84	[13]	0.876	0.900	1.27	0.0618
16q22.1	CDH1	rs9929218	A	0.91	[7]	0.262	0.274	0.93	0.5028

CHR: Chromosome; SNP: Single Nucleotide Polymorphism. The last four columns show the allele reported frequency in cases (F A), in controls (F U) and, the p and the Odds Ratio (OR) values obtained in the NXC-GWAS sample.

In bold type, SNPs with a nominal p-value below 0.05.

^†The nearest gene or the gene where the SNP is located.

*SNPs genotyped (not imputed).