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. Author manuscript; available in PMC: 2014 Jul 2.
Published in final edited form as: J Neurovirol. 2014 Feb 25;20(3):219–232. doi: 10.1007/s13365-014-0239-5

Table 3.

Regional P values from combined-genotype comparisons (HIV vs. Healthy Control) based on GMVT

Regions C/C
NHIV=12
Ncontrol=8		 FDR
q=0.05		 C/C+C/T
NHIV=20
Ncontrol=11		 FDR
q=0.05		 ALL
NHIV=23
Ncontrol=12		 FDR q=0.05
Temporal CTX 0.032 0.007 * 0.028
Caudate 0.353 0.516 0.245
Globus Pallidus 0.575 0.785 0.957
SMC 0.820 0.703 0.972
Frontal CTX 0.061 0.074 0.036
Cingulate CTX 0.087 0.020 0.012 *
Amygdala 0.207 0.864 0.909
Occipital CTX 0.401 0.143 0.099
Supramarginal CTX 0.005 * 0.0004 * 0.001 *
Thalamus 0.923 0.773 0.638
Parietal CTX 0.919 0.454 0.307
HPpHP 0.982 0.962 0.982
White Matter 0.005 * 0.008 * 0.005 *

The values of P<0.05 are in bold, and significant findings after correcting for false discovery rate (FDR) are indicated by an asterisk

CTX cortex, SMC supplementary motor cortex, HPpHP hippocampal/parahippocampal area