Table 5. Determined sequence types of reported clinical S. suis cases of infection in pigs from 1 January 2002 to 31 December 2013.
Country | Serotypesa | ST | ST complex | Number of cases | Reference |
---|---|---|---|---|---|
North America | |||||
Canada | 2 | 1 | 1 | 2 | 240 |
25 | 25 | 28 | 52,240 | ||
28 | 28 | 18 | 52 | ||
145 | 25 | 1 | MLST Database | ||
23 | 80 | Unrelated | 1 | 51 | |
24 | 68 | Unrelated | 1 | 51 | |
25 | 69 | Unrelated | 1 | 51 | |
27 | 72 | Unrelated | 1 | 51 | |
28 | 75 | Unrelated | 1 | 51 | |
29 | 92 | Unrelated | 1 | 51 | |
30 | 77 | Unrelated | 1 | 51 | |
31 | 70 | Unrelated | 1 | 51 | |
Not specified | 13 | 13/149 | Not specified | 51 | |
United States | 2 | 1 | 1 | 3 | 52 |
25 | 25 | 28 | 52 | ||
28 | 28 | 33 | 52 | ||
Europe | |||||
Denmark | 4 | 54 | 53/54 | 1 | 51 |
5 | 53 | 53/54 | 1 | 51 | |
6 | 55 | Unrelated | 1 | 51 | |
8 | 87 | 87 | 1 | 51 | |
9 | 82 | Unrelated | 1 | 51,240 | |
10 | 78 | Unrelated | 1 | 51 | |
11 | 91 | Unrelated | 1 | 51 | |
12 | 74 | Unrelated | 1 | 51 | |
13 | 71 | Unrelated | 1 | 51,241 | |
16 | 73 | Unrelated | 1 | 51 | |
Finland | 2 | 37 | Unrelated | 1 | 51 |
Not specified | 27 | 27 | Not specified | 51 | |
38 | Unrelated | 1 | 51 | ||
France | 2 | 1 | 1 | 4 | 242 |
140 | Unrelated | 1 | MLST Database | ||
141 | 1 | 1 | MLST Database | ||
142 | 28 | 1 | MLST Database | ||
143 | 1 | 1 | MLST Database | ||
144 | 1 | 1 | MLST Database | ||
229 | 25 | 1 | MLST Database | ||
230 | 25 | 1 | MLST Database | ||
14 | 231 | Unrelated | 1 | MLST Database | |
15 | 81 | Unrelated | 1 | MLST Database | |
Germany | 1/2 | 100 | Unrelated | 1 | 243 |
2 | 1 | 1 | 5 | 243 | |
25 | 25 | 1 | 243 | ||
28 | 28 | 2 | 243 | ||
97 | Unrelated | 1 | 243 | ||
3 | 95 | Unrelated | 1 | 243 | |
7 | 29 | 29 | 7 | 240,243 | |
89 | 16 | 1 | 243 | ||
9 | 93 | Unrelated | 1 | 243 | |
96 | Unrelated | 1 | 243 | ||
98 | 16 | 2 | 243 | ||
99 | 16 | 1 | 243 | ||
Italy | 2 | 1 | 1 | 1 | 86 |
9 | 138 | Unrelated | 1 | MLST Database | |
Netherlands | 1 | 1 | 1 | 4 | 62,240 |
13 | 13/149 | 2 | 51,62 | ||
149 | 13/149 | 1 | 62 | ||
156 | 1 | 1 | 62 | ||
1/2 | 1 | 1 | 1 | 62,240 | |
2 | 1 | 1 | 21 | 62,240 | |
20 | 147 | 19 | 62 | ||
29 | 29 | 1 | 62 | ||
134 | 1 | 1 | MLST Database | ||
146 | 1 | 1 | MLST Database | ||
3 | 15 | 16 | 1 | 62 | |
35 | 27 | 1 | 51 | ||
4 | 17 | 147 | 3 | 62 | |
7 | 29 | 29 | 5 | 62 | |
135 | 29 | 1 | MLST Database | ||
136 | 16 | 1 | 62 | ||
150 | Unrelated | 1 | 62 | ||
153 | Unrelated | 1 | MLST Database | ||
218 | Unrelated | 1 | 62 | ||
8 | 87 | 87 | 1 | 62 | |
198 | 16 | 1 | 62 | ||
9 | 1 | 1 | 2 | 62,240 | |
15 | 16 | 1 | 62 | ||
16 | 16 | 38 | 62 | ||
136 | 16 | 2 | 62 | ||
148 | 1 | 1 | 62 | ||
151 | 16 | 1 | 62 | ||
152 | 16 | 1 | MLST Database | ||
154 | 16 | 1 | MLST Database | ||
155 | 16 | 1 | 62 | ||
182 | Unrelated | 1 | 62 | ||
184 | Unrelated | 1 | MLST Database | ||
189 | Unrelated | 1 | 62 | ||
220 | Unrelated | 1 | 62 | ||
15 | 81 | Unrelated | 1 | 51 | |
Not specified | 183 | Unrelated | 1 | MLST Database | |
Spain | 1 | 1 | 1 | 2 | 244MLST Database |
1/2 | 1 | 1 | 2 | 244MLST Database | |
28 | 28 | 1 | MLST Database | ||
64 | 94 | 1 | 51 | ||
2 | 1 | 1 | 31 | 244 | |
5 | 1 | 1 | 51 | ||
27 | 27 | 1 | MLST Database | ||
28 | 28 | 1 | MLST Database | ||
86 | 1 | 1 | MLST Database | ||
124 | 1 | 1 | 244 | ||
3 | 14 | 147 | 1 | 51 | |
15 | 16 | 1 | 51 | ||
27 | 27 | 1 | MLST Database | ||
89 | 16 | 1 | 51 | ||
4 | 16 | 16 | 1 | 51,240 | |
5 | 17 | 147 | 1 | 51 | |
9 | 16 | 16 | 2 | 51,240 | |
59 | 123 | 1 | 51 | ||
123 | 123 | 8 | 244 | ||
125 | 123 | 9 | 244 | ||
361 | Unrelated | 1 | MLST Database | ||
367 | Unrelated | 1 | MLST Database | ||
14 | 1 | 1 | 1 | 244MLST Database | |
15 | 65 | Unrelated | 2 | 51 | |
27 | 65 | Unrelated | 2 | 51 | |
United Kingdom | 1 | 1 | 1 | 5 | 240,242MLST Database |
12 | 11 | 1 | 51 | ||
13 | 13/149 | 1 | 51 | ||
1 or 14 | 10 | 1 | 1 | 51 | |
2 | 1 | 1 | 37 | 240,242MLST Database | |
2 | 1 | 5 | 51 | ||
9 | 1 | 1 | 51 | ||
25 | 25 | 7 | MLST Database | ||
28 | 28 | 5 | MLST Database | ||
29 | 29 | 1 | MLST Database | ||
30 | 28 | 1 | MLST Database | ||
3 | 27 | 27 | 2 | 51 | |
29 | 29 | 1 | MLST Database | ||
31 | 28 | 2 | 51 | ||
33 | 27 | 1 | 51 | ||
42 | Unrelated | 1 | 51 | ||
4 | 23 | 87 | 3 | 51 | |
5 | 39 | Unrelated | 1 | MLST Database | |
44 | Unrelated | 1 | 51 | ||
7 | 29 | 29 | 6 | MLST Database | |
34 | 225 | 1 | 51 | ||
83 | 29 | 1 | 51 | ||
8 | 1 | 1 | 1 | MLST Database | |
9 | 46 | Unrelated | 1 | 51 | |
48 | Unrelated | 2 | 51 | ||
50 | Unrelated | 1 | 51 | ||
11 | 88 | Unrelated | 1 | 51 | |
14 | 1 | 1 | 14 | MLST Database | |
15 | 43 | 43/52 | 1 | 51 | |
45 | Unrelated | 1 | 51 | ||
49 | Unrelated | 1 | 51 | ||
52 | 43/52 | 1 | 51 | ||
16 | 41 | Unrelated | 2 | 51MLST Database | |
47 | Unrelated | 1 | 51 | ||
28 | 21 | 87 | 1 | 51 | |
Not specified | 40 | Unrelated | 1 | MLST Database | |
51 | Unrelated | 1 | MLST Database | ||
90 | Unrelated | 1 | MLST Database | ||
Asia | |||||
Mainland China | 2 | 1 | 1 | 49 | 59,245,246 |
7 | 7 | 216 | 59,241,242,245–247 | ||
25 | 25 | 1 | 246 | ||
28 | 28 | 31 | 59,245,246 | ||
86 | 1 | 1 | 245 | ||
117 | 27 | 27 | MLST database | ||
162 | 28 | 1 | 245 | ||
223 | 1 | 1 | MLST Database | ||
228 | 7 | 1 | MLST Database | ||
242 | 1 | 1 | MLST Database | ||
244 | 7 | 1 | MLST Database | ||
245 | 28 | 1 | MLST Database | ||
289 | 1 | 1 | 59 | ||
290 | Unrelated | 1 | MLST Database | ||
352 | Unrelated | 1 | MLST Database | ||
353 | Unrelated | 1 | MLST Database | ||
354 | Unrelated | 1 | MLST Database | ||
355 | Unrelated | 1 | MLST Database | ||
418 | Unrelated | 1 | MLST Database | ||
419 | Unrelated | 1 | MLST Database | ||
3 | 224 | Unrelated | 1 | MLST Database | |
7 | 129 | 29 | 1 | MLST Database | |
225 | 225 | 1 | MLST Database | ||
335 | Unrelated | 1 | MLST Database | ||
420 | Unrelated | 1 | MLST Database | ||
9 | 222 | Unrelated | 1 | MLST Database | |
226 | 226/227 | 1 | MLST Database | ||
227 | 226/227 | 1 | MLST Database | ||
239 | 239/241 | 1 | MLST Database | ||
241 | 239/241 | 1 | MLST Database | ||
417 | Unrelated | 1 | MLST Database | ||
11 | 260 | Unrelated | 1 | MLST Database | |
263 | Unrelated | 1 | MLST Database | ||
13 | 262 | Unrelated | 1 | MLST Database | |
27 | 258 | Unrelated | 1 | MLST Database | |
31 | 261 | 27 | 1 | MLST Database | |
265 | 27 | 1 | MLST Database | ||
Not specified | 29 | 29 | 1 | 59 | |
118 | Unrelated | 1 | 59 | ||
156 | 1 | 2 | 59 | ||
264 | Unrelated | 1 | MLST Database | ||
266 | Unrelated | 1 | MLST Database | ||
267 | Unrelated | 1 | MLST Database | ||
303 | Unrelated | 1 | MLST Database | ||
383 | Unrelated | 2 | MLST Database | ||
421 | Unrelated | 1 | MLST Database | ||
422 | Unrelated | 1 | MLST Database | ||
Japan | 1 | 1 | 1 | 1 | 53,248 |
2 | 1 | 1 | 5 | 53,248 | |
28 | 28 | 48 | 53,248 | ||
324 | 28 | 1 | 248 | ||
3 | 108 | 94 | 1 | 53 | |
117 | 27 | 1 | 53 | ||
7 | 29 | 29 | 1 | 53 | |
118 | Unrelated | 1 | 53 | ||
11 | 108 | 94 | 1 | 53 | |
Vietnam | 9 | 390 | Unrelated | 1 | MLST Database |
Serotypes were identified by co-agglutination (or an equivalent method using reference antisera), by PCR or, sometimes, by undefined methods.