Table 3.
Comparison of the Genomic Features in Xenorhabdus nematophila ATCC19061, X. bovienii SS-2004, X. doucetiae FRM16, and X. poinarii G6
| Feature |
X. nematophila ATCC19061 |
X. bovienii SS-2004 |
X. doucetiae FRM16 |
X. poinarii G6 | ||
|---|---|---|---|---|---|---|
| Chromosome | Plasmid | Chromosome | Chromosome | Plasmid | Chromosome | |
| Size (bp) | 4,432,590 | 155,327 | 4,225,498 | 4,195,202 | 8,449 | 3,659,522 |
| G+C content (%) | 44.19 | 45.97 | 44.97 | 45.71 | 45.09 | 44.55 |
| CDS | 4,299 | 175 | 4,260 | 3,974 | 12 | 3,715 |
| Coding density (%) | 80.52 | 79.62 | 85.64 | 85.93 | 50.21% | 84.67 |
| Mean CDS (bp) | 860 | 711 | 850 | 933 | 464 | 856 |
| Mean intergenic length (bp) | 163 | 150 | 158 | 155 | 495 | 164 |
| Repeated regions (%) | 16.58% | 17.99% | 16.27% | 16.18% | 0 | 9.21% |
| Pseudogenes | 99 | 4 | 58 | 45 | 0 | 38 |
| IS | 436 | ND | 369 | 192 | ND | 156 |
| Phage genes | 275 (6) | ND | 437 (8) | 157 (7) | 0 | 377 (7) |
| rRNA operons | 7 | 0 | 7 | 7 | 0 | 7 |
| tRNAs | 79 | 0 | 83 | 76 | 0 | 77 |
| Accession number | FN667742 | FN667743 | FN667741 | FO704550 | FO704549 | FO704551 |
Note.—ND, not determined.