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. 2014 Jul 2;9(7):e101065. doi: 10.1371/journal.pone.0101065

Table 4. Results of gene expression analysis in the public dataset GSE14333 with multivariate Cox and Kaplan-Meier method.

Probe Gene P-value from KM P-value from Cox Range risk ratio Range risk ratio lower limit Range risk ratio upper limit
229357_at ADAMTS5 6.04E-06 0.000201 34.0864 5.305339 219.0025
235368_at ADAMTS5 1.32E-06 8.75E-05 42.64678 6.539883 278.101
219935_at ADAMTS5 8.92E-05 0.000265 22.25267 4.200208 117.8945
1558636_s_at ADAMTS5 0.001966 0.005793 100.589 3.802689 2660.788
220726_at AHNAK2 0.26889 0.690171 0.697388 0.118539 4.102851
1558378_a_at AHNAK2 0.000362 0.00308 27.08616 3.047499 240.7416
212992_at AHNAK2 1.55E-06 3.46E-05 483.5156 25.93489 9014.392
209971_x_at AIMP2 0.000178 0.000173 0.056117 0.01248 0.252328
202138_x_at AIMP2 0.000483 5.44E-05 0.0415 0.00885 0.194598
209972_s_at AIMP2 0.012259 0.457615 0.415432 0.040911 4.218525
205572_at ANGPT2 0.007138 0.027838 11.73135 1.307621 105.248
236034_at ANGPT2 0.003749 0.000137 102.5228 9.496737 1106.794
211148_s_at ANGPT2 0.000103 0.066738 26.07117 0.798486 851.2436
237261_at ANGPT2 0.032343 0.153008 12.34905 0.392984 388.0543
1555269_a_at ANO1 0.005692 0.02366 23.37811 1.52436 358.5346
218804_at ANO1 0.001514 0.000249 88.27612 8.031295 970.2886
1555536_at ANTXR2 0.165872 0.448339 1.992017 0.33543 11.82999
225524_at ANTXR2 0.002183 0.00047 44.01017 5.278853 366.916
228573_at ANTXR2 0.005047 0.000316 19.32602 3.857263 96.82903
213015_at BBX 0.003728 0.006287 20.99437 2.364569 186.4033
1557239_at BBX 0.291266 0.980533 1.036403 0.058639 18.31775
223134_at BBX 6.95E-05 0.00274 30.21056 3.248415 280.9611
226331_at BBX 2.81E-05 8.81E-07 359.268 34.41053 3750.987
213016_at BBX 0.004471 0.000586 102.7534 7.326352 1441.135
223135_s_at BBX 6.36E-08 1.22E-05 45.64845 8.239986 252.8865
232008_s_at BBX 0.000531 9.24E-05 102.4825 10.06176 1043.82
1557240_a_at BBX 0.169963 0.299311 2.43368 0.453789 13.05188
213426_s_at CAV2 0.188766 0.031867 7.132542 1.18575 42.90378
203324_s_at CAV2 3.97E-07 4.18E-05 41.99252 7.026959 250.9438
203323_at CAV2 1.60E-09 2.04E-06 77.00721 12.82191 462.4983
229900_at CD109 0.041603 0.004916 26.16536 2.689981 254.5096
226545_at CD109 0.000325 0.00023 20.46414 4.105505 102.0048
200984_s_at CD59 0.000362 0.000149 55.54448 6.96658 442.8556
200983_x_at CD59 1.14E-06 3.41E-05 70.30158 9.407096 525.3813
200985_s_at CD59 9.51E-06 3.67E-05 52.14801 7.975754 340.9602
212463_at CD59 6.84E-07 1.22E-06 175.8647 21.78629 1419.626
228748_at CD59 0.004633 0.041237 7.88942 1.085611 57.33449
206430_at CDX1 6.36E-07 4.45E-05 0.030374 0.005675 0.162561
206387_at CDX2 0.0014 3.67E-05 0.073955 0.021472 0.254721
231606_at CDX2 0.000568 0.095068 0.303118 0.074635 1.231068
212746_s_at CEP170 0.000299 0.009884 23.82942 2.142353 265.055
207719_x_at CEP170 0.000131 6.49E-05 31.19191 5.766271 168.7287
234702_x_at CFTR 0.01694 0.27293 0.461545 0.115856 1.838699
215703_at CFTR 0.037325 1.37E-05 0.053111 0.014147 0.199386
217026_at CFTR 0.385981 0.252799 0.168605 0.007976 3.563921
215702_s_at CFTR 0.012329 0.000782 0.02279 0.002509 0.206981
234706_x_at CFTR 0.371555 0.578887 0.511618 0.047986 5.454732
205043_at CFTR 0.021692 3.17E-05 0.065349 0.018078 0.236224
239647_at CHST13 0.000319 3.61E-05 0.07416 0.021584 0.254811
242503_at CHST13 0.246465 0.263741 0.463753 0.120515 1.784564
223377_x_at CISH 0.01124 0.030594 0.153875 0.02821 0.839335
223961_s_at CISH 4.08E-05 5.85E-05 0.033215 0.006312 0.174775
221223_x_at CISH 0.002772 0.001846 0.036573 0.004558 0.293441
226910_at COMMD2 0.000633 0.000126 37.40157 5.872115 238.2237
223491_at COMMD2 3.60E-05 0.019365 10.47272 1.462487 74.99413
221563_at DUSP10 5.91E-05 0.001099 37.05756 4.233756 324.3604
215501_s_at DUSP10 1.84E-05 0.000388 26.5064 4.335402 162.0586
209588_at EPHB2 0.00033 9.89E-05 0.05185 0.011687 0.230028
209589_s_at EPHB2 0.010517 0.00193 0.082811 0.017148 0.399908
211165_x_at EPHB2 2.20E-05 0.000149 0.046433 0.0095 0.226942
210651_s_at EPHB2 0.027564 0.000968 0.060346 0.011386 0.319845
234158_at EPHB2 0.031839 0.169435 0.412742 0.116806 1.45845
233699_at EPHB2 0.231256 0.453665 1.688996 0.428775 6.653159
222303_at ETS2 0.006806 0.005887 0.114387 0.024448 0.535198
201328_at ETS2 0.000411 8.08E-05 0.081369 0.023375 0.283247
201329_s_at ETS2 0.000328 8.38E-05 0.065016 0.016656 0.253792
208621_s_at EZR 0.034737 0.097102 7.073765 0.7013 71.35055
217234_s_at EZR 0.044295 0.041498 9.910504 1.092409 89.90964
208622_s_at EZR 0.000622 0.001303 99.00849 6.013656 1630.07
208623_s_at EZR 4.02E-07 2.11E-05 1207.412 45.89005 31768.2
217230_at EZR 0.174403 0.140414 3.361179 0.670718 16.84393
238645_at EZR 0.021088 0.042168 11.38081 1.089858 118.8439
215200_x_at EZR 0.286994 0.318044 2.823012 0.368122 21.64879
225670_at FAM173B 2.61E-05 0.000117 0.033282 0.005894 0.187931
225668_at FAM173B 0.063779 0.343216 0.331004 0.033645 3.256445
234335_s_at FAM84A 1.84E-05 2.34E-05 0.021597 0.003653 0.127692
229546_at FAM84A 0.000894 2.59E-05 0.034042 0.007048 0.164431
225667_s_at FAM84A 0.000701 1.19E-05 0.013224 0.001908 0.091637
234331_s_at FAM84A 0.000489 3.23E-07 0.010521 0.001834 0.06036
231439_at FAM84A 0.002881 0.00016 0.043208 0.008456 0.220772
228459_at FAM84A 0.000124 0.00285 0.104682 0.023768 0.461058
228319_at FAM84A 0.088904 0.688981 0.609438 0.053918 6.888528
210095_s_at IGFBP3 0.00038 0.000122 34.81351 5.693815 212.8592
212143_s_at IGFBP3 3.87E-06 6.58E-05 40.75663 6.598764 251.7294
243027_at IGSF5 0.000113 0.001432 55.30184 4.691637 651.8607
229125_at KANK4 8.48E-06 0.000276 12.86927 3.247498 50.99869
217173_s_at LDLR 0.011169 0.16538 4.576761 0.533656 39.25138
202067_s_at LDLR 0.002542 0.120351 14.71872 0.494593 438.0182
202068_s_at LDLR 0.002236 0.000255 51.66079 6.236509 427.9376
217103_at LDLR 0.340416 0.568331 0.54143 0.065787 4.456002
217183_at LDLR 0.129907 0.480234 1.708543 0.386148 7.559592
217005_at LDLR 0.074924 0.228696 2.675823 0.538828 13.28814
205193_at MAFF 0.000158 0.000102 44.54421 6.562634 302.3461
211864_s_at MYOF 1.04E-05 0.000138 62.98781 7.483162 530.1855
201798_s_at MYOF 0.000208 2.47E-05 188.5189 16.51764 2151.602
217518_at MYOF 0.020004 0.166863 4.972052 0.511631 48.31859
206797_at NAT2 0.000112 2.13E-05 0.062607 0.017448 0.224656
201939_at PLK2 0.003791 7.69E-05 14.06108 3.792438 52.13371
209034_at PNRC1 1.45E-05 4.87E-05 31.43427 5.954339 165.9484
1555282_a_at PPARGC1B 0.060267 0.352001 0.505394 0.120092 2.126897
1553639_a_at PPARGC1B 3.01E-06 2.18E-05 0.03799 0.008394 0.171939
1563943_at PPARGC1B 0.458245 0.985653 1.014717 0.206439 4.98768
202052_s_at RAI14 5.41E-07 0.000287 2081.501 33.49958 129334.4
204217_s_at RTN2 0.000905 0.007263 165.478 3.970497 6896.612
222573_s_at SAV1 0.002144 0.027685 13.52864 1.331125 137.4957
218276_s_at SAV1 1.68E-06 4.00E-05 39.62951 6.846883 229.3742
234491_s_at SAV1 0.023935 0.012655 15.70887 1.802495 136.9039
236606_at SAV1 0.028297 0.161562 149.8623 0.134718 166709.5
204404_at SLC12A2 3.73E-06 0.000236 0.05294 0.011053 0.253562
225835_at SLC12A2 0.001286 0.007522 0.111752 0.022405 0.557401
232636_at SLITRK4 8.73E-06 0.000342 1081.219 23.6349 49462.24
204596_s_at STC1 0.001429 0.002766 128.3408 5.339502 3084.814
204595_s_at STC1 9.53E-06 0.000234 26.79181 4.6472 154.4589
230746_s_at STC1 0.000866 0.000953 17.63863 3.214301 96.79288
204597_x_at STC1 2.33E-06 0.002335 76.65634 4.689406 1253.079
238443_at TFAM 0.059819 0.225228 0.371229 0.074838 1.841456
203177_x_at TFAM 1.71E-05 0.000113 0.022829 0.00335 0.155556
208541_x_at TFAM 0.002744 0.054875 0.216047 0.045206 1.032524
203176_s_at TFAM 0.000342 0.003043 0.115476 0.027697 0.481457
238168_at TM4SF1 0.030768 0.014898 614.9803 3.498935 108090.2
209387_s_at TM4SF1 2.56E-08 2.02E-06 800.6651 50.79976 12619.44
215034_s_at TM4SF1 3.95E-07 1.61E-07 1067.398 78.60081 14495.26
209386_at TM4SF1 5.87E-10 8.06E-08 1440.194 101.0956 20516.8
215033_at TM4SF1 0.000849 0.024728 76.44376 1.736114 3365.936
203476_at TPBG 6.74E-05 0.000102 53.32757 7.179862 396.0842
224967_at UGCG 0.000167 0.000189 25.07686 4.619337 136.1341
204881_s_at UGCG 0.030888 0.25574 2.664385 0.491631 14.43957
221765_at UGCG 6.94E-05 0.01459 18.46403 1.778815 191.6559
205138_s_at UST 0.039899 0.095085 3.788817 0.792891 18.10481
205139_s_at UST 0.000152 8.32E-05 39.8298 6.355425 249.6155
214792_x_at VAMP2 0.00019 0.000615 45.85393 5.13567 409.4078
201556_s_at VAMP2 0.00036 0.000231 51.11359 6.295788 414.9757
201557_at VAMP2 0.001365 0.001694 1058.693 13.68399 81908.26