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. Author manuscript; available in PMC: 2015 Jul 1.
Published in final edited form as: Clin Cancer Res. 2014 Apr 29;20(13):3521–3530. doi: 10.1158/1078-0432.CCR-14-0395

Table 1. Binding free energiesa of Amoxapine, its metabolites, and Loxapine with bacterial β-glucuronidase.

Ligand ΔEvdw ΔEelectrostatic ΔGgas ΔGPB ΔGSA ΔGsolvent ΔGelectrostaticb ΔGnpc ΔGMMPBSA Glide
scored
AMOX −42.41 −7.42 −49.82 23.27 −2.82 20.45 15.85
45.23
−29.38 −8.09
7-OHAMOX −39.58 −7.28 −46.86 25.16 −2.74 22.43 17.88
42.32
−24.44 −8.33
8-OHAMOX −38.92 −13.07 −51.99 34.06 −3.09 30.97 20.99
42.01
−21.02 −8.59
Loxapine −45.48 −9.84 −55.32 47.49 −3.49 44.01 37.65
48.97
−11.32 −7.68
a

All the energies are in kcal/mol; Snapshots extracted from the last 2 ns MD simulation were submitted to MMPBSA.py for the free energy calculation.

b

Total electrostatic contribution: ΔGelectrostatic = ΔEelectrostatic + ΔGPB

c

Total nonpolar contribution: ΔGnp = ΔEvdw + ΔGSA

d

Glide docking score for initial poses.