Table 3.
SNVs of ATCC26695 sequence data from sample 6
| Nucleotide position (NC_000915) | Reference nucleotide (NC_000915) | Mutated nucleotide | Total reads | Reads of mutated nucleotide | Frequency of mutated nucleotide (%) | Annotations | |
|---|---|---|---|---|---|---|---|
| 1 |
130106 |
T |
C |
217 |
117 |
53.9 |
Gene: HP0119 |
| 2 |
130111 |
T |
G |
186 |
94 |
50.5 |
Gene: HP0119 |
| 3 |
301322 |
G |
T |
109 |
108 |
99.0 |
Gene: HP0289 |
| 4 |
1370263 |
G |
C |
101 |
99 |
98.0 |
Gene: rpmJ |
| 5 |
1428910 |
C |
A |
137 |
104 |
75.9 |
Gene: HP1366 |
| 6 |
1502547 |
T |
C |
345 |
184 |
53.3 |
|
| 7 | 1502549 | A | G | 345 | 184 | 53.3 |
Total reads and mutated reads indicate the number of reads that passed quality control.