Table 2.
Candidates for hypersensitivity initiation from microarray data
| RNA transcripts | Increased in incompatible clones | ||||
|---|---|---|---|---|---|
| Gene ID | Protein ID | Name | 6 h | 24 h | 72 h |
| PGSC0003DMG401010883 | PGSC0003DMP400019223 | R2r3-myb transcription factor | * | ||
| PGSC0003DMG402004331 | PGSC0003DMP400007701 | Conserved gene of unknown function | * | ||
| PGSC0003DMG400030212 | PGSC0003DMP400052593 | Nitrate reductase | * | ||
| PGSC0003DMG400001855 | PGSC0003DMP400003321 | Beta-amylase PCT-BMYI | * | ||
| PGSC0003DMG400036101 | PGSC0003DMP400058205 | Gene of unknown function | * | ||
| PGSC0003DMG400019518 | PGSC0003DMP400033920 | Pseudo response regulator | * | ||
| PGSC0003DMG400011502 | PGSC0003DMP400020369 | PEP carboxylase kinase | * | ||
| PGSC0003DMG400020209 | PGSC0003DMP400035084 | Nodulin family protein | * | ||
| PGSC0003DMG400001460 | PGSC0003DMP400002648 | Ninja-family protein Os03g0419100 | * | ||
| PGSC0003DMG400025240 | PGSC0003DMP400043812 | Axi 1 protein | * | ||
| PGSC0003DMG400020498 | PGSC0003DMP400035611 | Inositol-1,4,5-triphosphate-5-phosphatase | * | ||
| PGSC0003DMG400023702 | PGSC0003DMP400041014 | Calmodulin binding protein | * | ||
| PGSC0003DMG400023949 | PGSC0003DMP400041401 | Abscisic acid receptor PYL4 | * | ||
| PGSC0003DMG400001771 | PGSC0003DMP400003164 | Dead box ATP-dependent RNA helicase | * | ||
| PGSC0003DMG400001387 | PGSC0003DMP400002507 | Ocs element-binding factor | * | ||
| PGSC0003DMG400010759 | PGSC0003DMP400019038 | Gene of unknown function | * | ||
| PGSC0003DMG400000731 | PGSC0003DMP400001424 | Response to dessication RD2 | * | ||
| PGSC0003DMG400009982 | PGSC0003DMP400017630 | BTB/POZ domain-containing protein | * | ||
| PGSC0003DMG400003993 | PGSC0003DMP400007118 | Citrate binding protein | * | ||
| PGSC0003DMG400003057 | PGSC0003DMP400005490 | Osmotin | * | * | |
| PGSC0003DMG400015267 | PGSC0003DMP400026776 | Kunitz-type protease inhibitor | * | * | |
| PGSC0003DMG400026220 | PGSC0003DMP400045511 | Major pollen allergen Ory s 1 | * | * | |
| PGSC0003DMG400008100 | PGSC0003DMP400014249 | KiTH-2 | * | * | * |
| PGSC0003DMG400008099 | PGSC0003DMP400014248 | KiTH-2 | * | * | * |
| PGSC0003DMG400008098 | PGSC0003DMP400014247 | KiTH-2 | * | * | * |
Genes with increased expression in the two incompatible clones Sarpo Mira and SW93-1015, but not in compatible Desirée. Genes with a minimum 4-fold up-regulation in both Sarpo Mira and SW93-1015 at 6 or 24 hpi and stable or down-regulated in Desirée at 6 and 24 hpi were selected. Up-regulation is indicated with an asterisk. Bolded protein IDs and names indicate proteins for which abundance data was obtained. Symbol (*) indicates the time point in which the change was observed.