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. 2014 Jun 26;42(12):7489–7527. doi: 10.1093/nar/gku447

Figure 14.

Figure 14.

Mode of DNA binding by a TAL effector: DNA binding is mediated by a central region comprising a series of near-identical tandem repeats, usually 34 residues in length. The amino acid residues at positions 12 and 13 are hyper-variable (the ‘repeat variable di-residue’, or RVD). The side chain of residue 13 of each repeat determines the base recognized by that repeat in a simple but ambiguous 1:1 ‘recognition code’. The repeats precisely track the sense strand of the DNA, and so the order of the repeats determines the bp sequence recognized. The RVD (HD) is shown in red.