Table 3.
Model 1 |
Model 2 |
||||||||
---|---|---|---|---|---|---|---|---|---|
SNP | BP (hg19) | n, case/controlb | MAF, case/control | P-value | OR | 95% CI | P-value | OR | 95% CI |
rs1061147 | 196654324 | 1284/691 | 0.42/0.46 | 0.015 | 0.85 | 0.74, 0.97 | 0.017 | 0.83 | 0.71, 0.97 |
rs1061170 | 196659237 | 1281/691 | 0.37/0.39 | 0.17 | 0.91 | 0.8, 1.04 | 0.042 | 0.85 | 0.72, 0.99 |
rs74443307 | 196670520 | 1288/722 | 0.017/0.012 | 0.20 | 1.44 | 0.82, 2.54 | 0.29 | 1.42 | 0.74, 2.71 |
rs35453854 | 196684855 | 1284/693 | 0.050/0.065 | 0.029 | 0.73 | 0.55, 0.97 | 0.37 | 0.85 | 0.60, 1.21 |
rs379489 | 196693451 | 1285/688 | 0.26/0.29 | 0.13 | 0.89 | 0.77, 1.04 | 0.049 | 0.84 | 0.7, 1.00 |
rs3753396 | 196695742 | 1284/690 | 0.050/0.057 | 0.60 | 0.93 | 0.69, 1.23 | 0.46 | 0.88 | 0.63, 1.23 |
rs142902005 | 196696005 | 1284/691 | 0.0016/0.00 | — | — | — | — | — | — |
rs515299 | 196706677 | 1284/690 | 0.20/0.22 | 0.22 | 0.91 | 0.77, 1.06 | 0.17 | 0.88 | 0.72, 1.06 |
rs1065489 | 196709774 | 1285/693 | 0.051/0.058 | 0.53 | 0.91 | 0.69, 1.21 | 0.35 | 0.85 | 0.61, 1.19 |
rs34362004 | 196711098 | 1284/694 | 0.013/0.017 | 0.28 | 0.74 | 0.43, 1.28 | 0.49 | 0.79 | 0.41, 1.53 |
rs35274867 | 196712596 | 1284/692 | 0.032/0.022 | 0.081 | 1.46 | 0.95, 2.24 | 0.011a | 2.00 | 1.17, 3.40 |
rs34247141 | 196715063 | 1285/693 | 0.12/0.13 | 0.15 | 0.86 | 0.7, 1.06 | 0.63 | 0.94 | 0.73, 1.21 |
rs371680052 | 196716472 | 1286/691 | 0.0023/0.0014 | 0.55 | 1.63 | 0.33, 8.20 | 0.49 | 1.84 | 0.33, 10.17 |
MAF, minor allele frequency; OR, odds ratio; CI, confidence interval.
Model 1: Additive model adjusted for APOL1 and admixture.
Model 2: Model 1 + age and gender.
aDominant model (LOF to additive P < 0.05).
bSample sizes reflect those with complete clinical and genotypic data used in each analysis