TABLE 6.
Protein | PDB ID | Chain ID | Metal | Geometrya | CN |
---|---|---|---|---|---|
EfaCBM33 | 4ALC | A | Cu2+ | tbp | 5 |
EfaCBM33 | 4ALT | A | Cu+ | Tsh | 3 |
SmaCBP21 | 2BEM | A | |||
2BEM | B | ||||
2BEM | C | Na+ | sqpl | 4 | |
BamCBM33 | 2YOX | A | Cu+ | Tsh | 3 |
B | Cu+ | Tsh | 3 | ||
2YOY | A | Cu+ | Tsh | 3 | |
B | Cu+ | Tsh | 3 | ||
PchGH61D | 4B5Q | A | Cu2+ | Oh | 6b |
B | Cu2+ | Oh | 6b | ||
NcrPMO-2 | 4EIR | A | Cu2+ | Oh | 6 |
B | Cu2+ | Oh | 6 | ||
NcrPMO-3 | 4EIS | A | Cu2+ | Oh | 6c |
B | Cu2+ | sqpy | 5 | ||
TteGH61E-1 | 3EII | A | Zn2+ | Oh | 6 |
B | Zn2+ | Oh | 6 | ||
C | Zn2+ | Oh | 6 | ||
D | Zn2+ | sqpy | 5 | ||
TteGH61E-2 | 3EJA | A | Mg2+ | sqpy | 6d |
B | Mg2+ | tbp | 5e | ||
C | Mg2+ | sqpy | 5 | ||
D | Mg2+ | sqpy | 5 | ||
HjeGH61B | 2VTC | A | Ni2+ | Oh | 6f |
B | Ni2+ | Oh | 6 | ||
TauGH61A | 2YETg | A | Cu2+ | Oh | 6 |
B | Cu2+ | Oh | 6 | ||
TauGH61A | 3ZUDh | A | Cu2+ | ||
AoAA11 | 4MAH | A | Zn2+ | Tsh | 3 |
4MAI | A | Cu2+ | Tsh | 3 |
a tbp, trigonal bipyrimidal; Tsh, T-shaped; Oh, octahedral; sqpl, square planar; sqpy, square pyramidal.
b A glycerol molecule coordinates the two positions around the copper ion; it is not modeled as such.
c Long distances to O 3.6 Å and superoxide 3.44 Å.
d Coordinates an SO42− at 4.1 Å.
e Coordinates an SO42− at 4.1 Å.
f One oxygen ligand at 1.21 Å.
g Copper ions modeled with 20% occupancy.
h Copper modeled in dual conformations, partly surrounded by unmodeled density and a glycerol.