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. Author manuscript; available in PMC: 2015 Sep 1.
Published in final edited form as: Biochim Biophys Acta. 2014 Mar 1;1838(9):2289–2295. doi: 10.1016/j.bbamem.2014.02.019

Figure 5.

Figure 5

Validation of DA methodology using MD simulations of DDFQ of TOE in lipid bilayer. MD-generated distribution (density profile) of the TOE indole ring (shaded), is compared to the distribution generated from pseudo-quenching data (circles in Fig. 4) by the extended DA procedure utilizing Eqs. 1 and 2 (dashed line). Close resemblance of the two profiles demonstrates that DA is capable not only of accurately estimating the average depth but also the width of the depth distribution. See text and (5) for details.