Table 1.

Information on the 35 population samples genotyped in the present study

Sample number1	Country	Ethnicity	ISO639-3 (or local) abbreviation2	Linguistic family	Language branch	Population	Province/City/Region	County	Sample size
1	China (Han)	Fujian	nan	Sino-Tibetan	Hokien (Minnan)	34.880,000	Southeast Coast	Fujian	55
2	Taiwan (Han)	Miscellaneous Han (including undefined Minnan/Hakka)	ad	Sino-Tibetan	Hokien (Minnan)	14,000,000	Taiwan	Taipei	258
3		Minnan	nan	Sino-Tibetan	Hokien (Minnan)	14,000,000	Taiwan	Taipei	60
4		Hakka	hak	Sino-Tibetan	Hakka	2,370,000	Taiwan	Xinzhu	34
5	Taiwan Plain tribes/Pingpu	Kulon-Pazeh	uun	Sino-Tibetan	Hokien (Minnan)	300	Taiwan West Coast	Puli	40
6		Yunlin*	fos	Sino-Tibetan	Hokien (Minnan)	10,000	Taiwan West Coast	Yunlin	21
7		Papora*	ppu	Sino-Tibetan	Hokien (Minnan)	-	Taiwan West Coast	Gomach	18
8		Ketagalan	kae	Austronesian	extinct Paiwanic	1,000	Northeast Taiwan	Yilan	30
9		Siraya	fos	Austronesian	Taivoa and Makatao	10,000	Southwest Taiwan	Southwest Taiwan	261
10	Taiwan (Mountain tribes Aborigines)	Atayal	tay	Austronesian	Atayalic	80,061	Moutain tribes	Wulai	52
11		Truku (Taroko)	trv	Austronesian	Atayalic	25,800	Moutain tribes	Hualien	20
12		Saisiyat	xsy	Austronesian	Northwest Formosan	5,900	Moutain tribes	Wofeng	24
13		Thao	ssf	Austronesian	Paiwanic	693	Moutain tribes	Nantou	16
14		Tsou	tsu	Austronesian	Tsouic	6,733	Moutain tribes	Jiaye	41
15		Bunun	bnn	Austronesian	Bunun	51,447	Moutain tribes	Nantou	56
16		Rukai	dru	Austronesian	Rukai	11,911	Moutain tribes	Kaohsiung	29
17		Paiwan	pwn	Austronesian	Paiwanic	88,323	Moutain tribes	Taitung	25
18		Puyuma	pyu	Austronesian	Paiwanic	11,850	Moutain tribes	Taitung	23
19		Amis	ami	Austronesian	East Formosan	183,799	East Coast	Hualien	39
20		Yami	tao	Austronesian	Malayo-Polynesian	3,748	Southeast island	Tao/LanYu	30
21	Philippines	Batan	ivb	Austronesian	Malayo-Polynesian	1,350	Philippines	Philippines	24
22		Luzon	lz	Austronesian	Malayo-Polynesian	47,000,000	Philippines	Philippines	61
		Luzon unknown							3
23		Mindanao	mind	Austronesian	Malayo-Polynesian	16,000,000	Philippines	Philippines	8
24		Visayas	vis	Austronesian	Malayo-Polynesian	6,398,628	Philippines	Philippines	31
		Philippines unknown							19
25	Indonesia	Borneo (Kalimantan)	bor	Austronesian	Malayo-Polynesian	11,331,558	Borneo	Indonesia	22
		Borneo unknown							3
26		Sulawesi	sul	Austronesian	Malayo-Polynesian	14,111,444	Sulawesi	Indonesia	17
27		Sumatra (South)	sum	Austronesian	Malayo-Polynesian	43,309,707	Sumatra	Indonesia	18
		Sumatra unknown							8
28		Java (Central, East or West)	jav	Austronesian	Malayo-Polynesian	75,200,000	Java	Indonesia	131
		Javanese unknown							10
29		Timor	tim	Austronesian	Central-Eastern Malayo-Polynesian	3,800,000	Timor	Indonesia	4
30		Maluku (Ambon)	mal	Austronesian	Central-Eastern Malayo-Polynesian	2,549,454	Maluku	Indonesia	18
		Nusa Tengarra							1
		Indonesian unknown							14
31	Malaysia	Peninsular Malaysia	zsm/meo	Austronesian	Malayo-Polynesian	2,600,000	North Perak	Taiping	8
32	Thailand	Akha	ahk	Sino-Tibetan	Akha	56,600	Changmai	Changmai	27
33		Thailand	tha	Tai-Kadai (Daic)	Tai	20,200,000	Bangkok	Bangkok	75
34	Myanmar	Union of Myanmar	mian	Sino-Tibetan	Burmic	28,877,000	Northeast Burma	Yonggong	2
35	Vietnam	Vietnam	vie	Austro-Asiatic	Mon-Khmer	65,800,000	Hanoi	Hanoi	24
Total									1660

¹Sample numbers as in Figure 1.

²Detailed information and ISO639-3 codes can be searched online version of “Ethnologue” by: Lewis, M. Paul [35]: http://www.ethnologue.com/.

*Not clearly defined as plain tribes.