Figure 2.

Two inPHAP visualizations showing SNVs for the MLD associated gene ARSA. Data was taken from Phase 1 of the 1000 Genomes Project [24]. For both visualizations the reference color encoding was used. A: shows a non-aggregated view of the data, B: shows an aggregated view of the data. Individuals have been aggregated according to their population affiliation using the “minimum” aggregation method for SNVs. Bar heights represent rarity of the aggregated consensus base. Population abbreviations: ASW, African ancestry in Southwest United States; CEU, Utah residents with ancestry from Northern and Western Europe; CHB, Han Chinese in Beijing, China; CHS, Han Chinese South, China; CLM, Colombians in Medellin, Colombia; FIN, Finnish in Finland; GBR, British from England and Scotland; IBS, Iberian populations in Spain; LWK, Luhya in Webuye, Kenya; JPT, Japanese in Tokyo, Japan; MXL, people with Mexican ancestry in Los Angeles, California; PUR, Puerto Ricans in Puerto Rico; TSI, Tuscani in Italy; YRI, Yoruba in Ibadan, Nigeria. Superpopulation abbreviations: AFR, African; AMR, Americas; ASN, East Asian; EUR, European.