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. 2014 Jul 10;15:200. doi: 10.1186/1471-2105-15-200

Figure 5.

Figure 5

inPHAP phased haplotype view for the 100-kb region on chromosome 2 spanning the genes ALMS1 , NAT8 and ALMS1P, after filtering of rare variants with a frequency < 0.5% across the 1096 human individuals of Phase 1 of the 1000 Genomes Project [24]. The bases A,C,T,G are colored green, blue, red and yellow respectively. Individuals are sorted according to their affiliation with a common population, and subsequently aggregated according to a specific population using the “minimum” aggregation method for SNVs. A: SNVs on the paternal chromosome are shown. B: SNVs on the maternal chromosome are shown. For abbreviations of the population names see Figure 2.