Table 1.
Belief learning (δ) |
Learning rate (ρ) |
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Function | Gene | SNPs | PCs | % Var | k* | LLR | punc | pperm | pemp | LLR | punc | pperm | pemp |
Synthesis | TH | 2 | 2 | 100 | 1,089 | 0.98 | 0.374 | 0.898 | 0.888 | 0.9 | 0.400 | 0.913 | 0.932 |
DDC | 20 | 4 | 90 | 162 | 3.45 | 0.141 | 0.943 | 0.963 | 29.3 | 0.000 | 0.257 | 0.278 | |
VMAT2 | 16 | 8 | 92 | 22 | 31.1 | 0.000 | 0.420 | 0.410 | 12.3 | 0.002 | 0.969 | 1.000 | |
Transport/clearance | DAT1 | 9 | 5 | 93 | 73 | 9.35 | 0.002 | 0.821 | 0.808 | 68.6 | 0.000 | 0.024 | 0.027 |
VNTR | 0.22 | 0.510 | 0.796 | 34.5 | 0.000 | 0.008 | |||||||
Joint | 9.7 | 0.007 | 0.877 | 86.9 | 0.000 | 0.014 | |||||||
COMT | 17 | 4 | 91 | 191 | 57.3 | 0.000 | 0.005 | 0.005 | 49.8 | 0.000 | 0.038 | 0.031 | |
MAOA | 22 | 1 | 94 | 4 | 12.3 | 0.000 | 0.082 | 0.25 | 0.2 | 0.495 | 0.834 | 1.000 | |
VNTR | 3.5 | 0.136 | 0.687 | 17.4 | 0.000 | 0.498 | |||||||
Joint | 32.1 | 0.000 | 0.029 | 32.7 | 0.000 | 0.691 | |||||||
MAOB | 28 | 3 | 95 | 70 | 32.7 | 0.000 | 0.035 | 0.029 | 1.2 | 0.000 | 0.585 | 0.586 | |
Receptor | DRD1 | 5 | 3 | 99 | 275 | 9.22 | 0.000 | 0.522 | 0.510 | 9.76 | 0.000 | 0.639 | 0.647 |
DRD2 | 17 | 5 | 94 | 159 | 24.8 | 0.000 | 0.295 | 0.296 | 67.5 | 0.000 | 0.036 | 0.025 | |
DRD3 | 6 | 3 | 97 | 289 | 2.49 | 0.174 | 0.881 | 0.917 | 23.9 | 0.000 | 0.219 | 0.201 | |
DRD4 | 1 | 1 | 100 | 975 | 3.40 | 0.009 | 0.335 | 0.396 | 9.46 | 0.000 | 0.193 | 0.183 | |
VNTR | 11.9 | 0.000 | 0.247 | 12.5 | 0.000 | 0.314 | |||||||
Joint | 12.0 | 0.000 | 0.398 | 25.8 | 0.000 | 0.207 |
PCs, principal components; % Var, percent of total variance captured by included PCs; punc, P value using likelihood ratio test; pperm, permutation P value (see SI Materials and Methods); pemp, empirical P value (see SI Materials and Methods); TH, tyrosine hydroxylase; VMAT2, vesicular monoamine transporter 2.
Number of matched comparison genes chosen from the GWA dataset.