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. 2014 Jun 20;14:137. doi: 10.1186/1471-2148-14-137

Figure 4.

Figure 4

Phylogeny of feliform CanSINEs. A consensus phylogeny based on neighbor-joining optimization of feliform CanSINEs, based on 87 aligned tRNA-related regions and 2 RepBase voucher sequences, depicts two SINE subfamilies, I and II, with internal clades of subtypes A and B in subfamily II. Numbers in bold indicate support scores based on 1000 pseudo-replicates. Branch colors blue, red and violet indicate sequences characterized belonging to subfamily I, subfamily II type A and subfamily II type B, respectively. The full alignment including terminal labels is in Figure 3.