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. 2014 Jul 7;9(7):e102006. doi: 10.1371/journal.pone.0102006

Table 1. Genetic characterizations of haplotypes of C. andersoni at MS1, MS2, MS3 and MS16 loci.

Haplotype MS1 MS2 MS3 MS16
Accession No.a Repeatsb Accession No.a Repeatb Polymorphic site Accession No.a Repeatsb Polymorphic site Accession No.a Repeatb
a (n) b (n) c (n) 278 489 d (n) e (n) 220 473 f (n)
A1 HM565067 3 14 HM565078 11 T G HM565095 2 2 A C HM565086 14
A2 JF732838 3 13 HM565079 10 T G HM565097 2 3 G C JF732872 12
A3 JF732836 3 12 HM565080 10 C A HM565094 2 3 G T
A4 JF732843 3 15 JF732853 10 C G HM565096 2 2 G C
A5 JF732845 3 16 JF732851 11 C G
A6 JF732846 3 17
a

Accession numbers of all the reference sequences from GenBank.

b

The small letters a to f in the horizontal subheading represent the repeats at the four loci: a = (TAAAGGGCGAGA); b = (GAACGAGATAGG); c = (CCATACCTC); d = (TGTTGGTGTTGCTGT); e = (TGCTGCAGCTGC); f = (CTTCTTCAT).