Table 1.
Genome sequencing and annotation summary
Species | Size of genome assembly (Mbp) | Scaffold N50 (Mbp) | Repetitive content(%) | GC (%) | Predicted number of genes | Number of genes in orthologous clusters with other species | Number of genes in ancestral bilaterian gene families | Mean number of exons per gene (with ≥2 orthologues) | Mean exon length (bp) | Mean intron length (bp) |
---|---|---|---|---|---|---|---|---|---|---|
Lottia gigantea | 348 | 1.87 | 21 | 33 | 23,800 | 16,183 | 10,681 | 8 | 213 | 787 |
Capitella teleta | 324 | 0.19 | 31 | 40 | 32,389 | 20,537 | 11,911 | 7 | 221 | 291 |
Helobdella robusta | 228 | 3.06 | 33 | 33 | 23,400 | 13,820 | 8,707 | 8 | 203 | 526 |
GC, fraction of guanine plus cytosine nucleobases; Scaffold N50, the length such that half of the assembled sequence is in scaffolds longer than this length; Mbp, megabase pairs.