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. 2014 Mar 18;65(13):3579–3593. doi: 10.1093/jxb/eru100

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© The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 2. — Shared expression based on function in NAD-ME (white set) versus all C₄ species (grey set). Up- and down-regulated functions are based on expression of functions represented by enzyme classifiers (EC) (A, B) and by Pfam domain combinations (PDC) (C, D). PPDK, pyruvate phosphate dikinase; PPase, inorganic pyrosphate phosphorylase; AMK, adenosine monophosphate kinase; PEPC, phosphoenolpyruvate carboxylase; AspAT, aspartate aminotransferase; MDH, malate dehydrogenase; ME, malic enzyme; PDH, pyruvate dehydrogenase; PEP-CK, phosphoenolpyruvate carboxykinase; AlaAT, alanine aminotransferase; CBBC, Calvin–Benson–Bassham cycle; PR, photorespiration; Asp, aspartate; PPT, phosphoenolpyruvate phosphate translocator; PS, photosynthesis; BASS2, pyruvate transporter; NHD sodium proton antiporter; all functions are listed in Supplementary Table S2 at JXB online.