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. 2014 Jul 8;9(7):e101663. doi: 10.1371/journal.pone.0101663

Figure 4. Two possible deprotonation pathways of lysine through D117.

Figure 4

(A) Average structure (A′) in the first cluster in R2_H MD simulations and its optimized conformation (A″). (B) The second clustered structure (B′) and its optimized conformation (B″).