Table 1.
Primer sequences used for detection of cagA gene status and IL-8 or vacA gene polymorphisms
| Locus | Primers | Size (bp) |
| IL-8 -251 | Common primer, 5’-tgc ccc ttc act ctg tta ac-3’ | 336 |
| A allele, 5’-cca caa ttt ggt gaa tta tca at-3’ | ||
| T allele, 5’-cca caa ttt ggt gaa tta tca aa-3’ | ||
| β-globin | 5’- aca caa ctg tgt tca cta gc -3’ | 100 |
| 5’- caa ctt cat cca cgt tca cc -3’ | ||
| cagA | 5’-aat aca cca acg cct cca ag-3’ | 400 |
| 5’-ttg ttg ccg ctt ttg ctc tc-3’ | ||
| vacA | ||
| S1 and s2 | 5’-ctg ctt gaa tgc gcc aaa c-3’ | s1 = 259 |
| 5’-atg gaa ata caa caa aca cac-3’ | s2 = 286 | |
| m1 and m2 | 5’-gcg tct aaa taa ttc caa gg-3’ | m1 = 570 |
| 5’-caa tct gtc caa tca agc gag-3’ | m2 = 645 | |
| glmM | 5’-aag ctt tta ggg gtg tta ggg gtt t-3’ | 294 |
| 5’-aag ctt act ttc taa cac taa cgc-3’ | ||