Skip to main content
. 2006 Aug 28;12(32):5205–5210. doi: 10.3748/wjg.v12.i32.5205

Table 1.

Primer sequences used for detection of cagA gene status and IL-8 or vacA gene polymorphisms

Locus Primers Size (bp)
IL-8 -251 Common primer, 5’-tgc ccc ttc act ctg tta ac-3’ 336
A allele, 5’-cca caa ttt ggt gaa tta tca at-3’
T allele, 5’-cca caa ttt ggt gaa tta tca aa-3’
β-globin 5’- aca caa ctg tgt tca cta gc -3’ 100
5’- caa ctt cat cca cgt tca cc -3’
cagA 5’-aat aca cca acg cct cca ag-3’ 400
5’-ttg ttg ccg ctt ttg ctc tc-3’
vacA
S1 and s2 5’-ctg ctt gaa tgc gcc aaa c-3’ s1 = 259
5’-atg gaa ata caa caa aca cac-3’ s2 = 286
m1 and m2 5’-gcg tct aaa taa ttc caa gg-3’ m1 = 570
5’-caa tct gtc caa tca agc gag-3’ m2 = 645
glmM 5’-aag ctt tta ggg gtg tta ggg gtt t-3’ 294
5’-aag ctt act ttc taa cac taa cgc-3’