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. 2013 Oct 6;7:61–74. doi: 10.4137/JEN.S12453

Table 2.

List of the 6 selected genes/proteins implicated in ‘Semaphorin signaling in neurons’ summarizing the spot number, differential expression ratios, sequence coverage, subcellular localization, and molecular functions.

IDENTIFIER PROTEIN NAME SPOT NUMBER P10/P30 ± STDEV A/P30 ± STDEV P10/A ± STDEV SEQUENCE COVERAGE (%) SUBCELLULAR LOCALIZATION MOLECULAR FUNCTIONS
COF1_MOUSE Cofilin 1. non-Muscle 2220 1.98 ± 0.35 2.16 ± 0.42 74 0005737: cytoplasm; 0044464: cell part; 0031252: cell leading edge; 0042995: cell projection; 0016020: membrane; 0005856: cytoskeleton; 0005634: nucleus 0005515: protein binding

DPYL1_MOUSE Collapsin Response Mediator Protein 1 789 2.39 ± 0.55 2.41 ± 0.57 31 0043005: neuron projection; 0005737: cytoplasm; 0005856: cytoskeleton; 0043025: neuronal cell body; 0043234: protein complex 0016787: hydrolase activity; 0005515: protein binding
802 3.39 ± 1.3 4.5 ± 1.72 35

DPYL2_MOUSE Collapsin Response Mediator Protein 2 527 5.71 ± 0.37 8.4 ± 1.08 33 0043005: neuron projection; 0005737: cytoplasm; 0005739: mitochondrion; 0043234: protein complex; 0043025: neuronal cell body; 0030427: site of polarized growth 0016787: hydrolase activity; 0005515: protein binding
533 4.18 ± 0.45 5.55 ± 0.44 3
545 2.54 ± 0.64 3.74 ± 0.97 31
549 1.64 ± 0.29 40
562 4.29 ± 0.38 5.37 ± 0.62 53
585 3.59 ± 0.72 −1.53 ± 0.05 5.5 ± 1.1 52
589 2.5 ± 0.25 3.19 ± 0.51 41
685 2.3 ± 0.28 −1.51 ± 0.05 3.46 ± 0.38 8
705 1.8 ± 0.3 2.08 ± 0.35 63
721 1.85 ± 0.2 59
731 1.45 ± 0.13 71
743 1.89 ± 0.29 63
664 2.36 ± 0.35 3.19 ± 0.33 47

DPYL4_MOUSE Collapsin Response Mediator Protein 3 790 2.25 ± 0.21 −1.7 ± 0.06 3.83 ± 0.42 53 0005737: cytoplasm 0016787: hydrolase activity; 0005515: protein binding

DPYL3_MOUSE Collapsin Response Mediator Protein 4 664 2.36 ± 0.35 3.19 ± 0.33 30 0005737: cytoplasm; 0031252: cell leading edge; 0042995: cell projection; 0005856: cytoskeleton; 0043234: protein complex; 0031982: vesicle; 0043231: intracellular membrane-bounded organelle; 0005576: extracellular region; 0030427: site of polarized growth; 0043005: neuron projection; 0044464: cell part 0016787: hydrolase activity; 0005515: protein binding; 0043167: ion binding
729 −1.87 ± 0.09 −1.62 ± 0.09 37
784 3.97 ± 0.85 −2.6 ± 0.04 10.33 ± 2.34 50
787 6.6 ± 1.53 −6.18 ± 0.01 40.74 ± 9.87 46
810 6.9 ± 1.38 −2.83 ± 0.06 19.56 ± 4.95 24
814 2.95 ± 0.38 −1.71 ± 0.06 5.06 ± 0.78 45
823 7.83 ± 2.25 10.18 ± 3.45 19
834 3.8 ± 0.8 −1.76 ± 0.07 6.66 ± 1.4 50
800 5.86 ± 0.59 −2.87 ± 0.04 16.85 ± 2.19 44

DPYL5_MOUSE Collapsin Response Mediator Protein 5 782 2.73 ± 0.8 4.78 ± 1.29 62 0043005: neuron projection; 0005737: cytoplasm; 0043025: neuronal cell body 0016787: hydrolase activity; 0005515: protein binding