Table 3.
Comparison of TDP1 and TDP2.
| TDP1 | TDP2 | |
|---|---|---|
| Family | Phospholipase D (PLD) | Mg2+/Mn2+-dependent phosphodiesterases (MDP) |
| Substrates | DNA-phosphotyrosines (Top1) 3′-phosphoglycolates 3′-nucleosides |
DNA-phosphotyrosines (Top2, Top3?) RNA-phosphotyrosine (VPg unlinkase) |
| Polarity | 3′ ≫ 5′ [45,68] | 5′ ≫ 3′ [134] |
| Catalytic mechanism | Covalent intermediate [73] | Two-metal catalysis [134] |
| Amino acids | 608 residues | 362 residues |
| Molecular weight | 68 kDa | 41 kDa |
| Genomic location | 14q32.11 | 6p22.3-p22.1 |
| Associated disease | SCAN1 [79] | Reading disability [197–199] Parkinson disease [200–202] |
| Knockout mice | Yes [51,203] | Yes [132] |
| Crystal structure with substrate | Yes [75] | Yes [137] |