Table 2. Target dataset consists of 12 protein fold with structurally similar sequence dissimilar protein sequences.
β-Strands | α-Helix | ||||||
---|---|---|---|---|---|---|---|
Fold Class and Fold Type | Sequence Length | #Strand | #res | #Helix | #res | #Loop res | Min SEQ ID |
All beta Proteins | |||||||
GFP-like protein | 212 ~ 238 | 11 | 125 | 5 | 24 | 89 | 10 |
Cupredoxin-like proteins | 102 ~ 108 | 6 | 37 | 1 | 3 | 65 | 15 |
Acid Proteases | 99 ~ 113 | 5 | 45 | 1 | 4 | 50 | 27 |
Ribosomal Protein L14 | 122 ~ 138 | 5 | 35 | 2 | 10 | 76 | 35 |
Alpha and beta (α + β) Proteins | |||||||
β-Grasp (Ubiquitin-like) protein | 72 ~ 79 | 4 | 22 | 2 | 14 | 39 | 10 |
Nucleoside Triphosphate Hydrolase | 165 ~ 180 | 6 | 46 | 6 | 49 | 84 | 16 |
RNAase A-like proteins | 101 ~ 133 | 7 | 41 | 3 | 25 | 58 | 28 |
Cysteine Proteinases | 201 ~ 218 | 6 | 36 | 6 | 55 | 129 | 33 |
Alpha and beta (α/β) Proteins | |||||||
50 S Ribosomal Protein L25 | 94 ~ 98 | 6 | 43 | 3 | 20 | 31 | 16 |
50 S Ribosomal Protein L6P | 164 ~ 191 | 13 | 70 | 3 | 36 | 71 | 23 |
Difydrofolate reductase-like proteins | 159 ~ 186 | 10 | 49 | 4 | 34 | 76 | 27 |
Pyruvate kinase N-terminal domain | 97 ~ 101 | 8 | 35 | 2 | 7 | 80 | 30 |
Here, table lists the 12 protein folds with structurally similar sequence dissimilar protein sequences which are used as target dataset. Fold class and title is listed in first column, second column shows the sequence length of representative structures of each fold. For each fold, secondary structure elements information, i.e. total number of residues involved in strand, helix and loop, are listed. Here, Min SEQ ID indicates the minimum sequence identity among the sequences representing the particular fold.