Abstract
In the present study, we evaluated the antitumor effect of two synthetic analogs of vitamin D, namely PRI-2191 [(24R)-1,24-dihydroxyvitamin D3] and PRI-2205 (5,6-trans calcipotriol), in combined human colon HT-29 cancer treatment with 5-fluorouracil (5-FU). Mice bearing HT-29 tumors transplanted subcutaneously or orthotopically were injected with vitamin D analogs and 5-FU in various schedules. A statistically significant inhibition of subcutaneous or orthotopic tumor growth was observed as a result of combined therapy. In HT-29 tumors and in cells from in vitro culture, we observed increased vitamin D receptor (VDR) expression after treatment with either PRI-2205 or 5-FU alone, or in combination. Moreover, PRI-2205 decreased the percentage of cells from intestinal tumors in G2/M and S stages and increased sub-G1. Increased VDR expression was also observed after combined treatment of mice with 5-FU and PRI-2191. Moreover, our docking studies showed that PRI-2205 has stronger affinity for VDR, DBP and CAR/RXR ligand binding domains than PRI-2191. PRI-2191 analog, used with 5-FU, increased the percentage of subcutaneous tumor cells in G0/G1 and decreased the percentage in G2/M, S and sub-G1 populations as compared to 5-FU alone. In in vitro studies, we observed increased expression of p21 and p-ERK1/2 diminution via use of both analogs as compared to use of 5-FU alone. Simultaneously, PRI-2191 antagonizes some pro-apoptotic activities of 5-FU in vitro. However, in spite of these disadvantageous effects in terms of apoptosis, the therapeutic effect expressed as tumor growth retardation by PRI-2191 is significant. Our results suggest that the mechanism of potentiation of 5-FU antitumor action by both analogs is realized via increased p21 expression and decreased p-ERK1/2 level which may lead to diminution of thymidylate synthase expression. Higher binding affinity for VDR, DBP, but also for CAR\RXR ligand binding domain of PRI-2205 may, in part, explain its very low toxicity with sustained anticancer activity.
Keywords: vitamin D analogs, colon cancer, combined treatment, 5-fluorouracil
Introduction
According to clinical and epidemiological studies, vitamin D and calcium may reduce the risk of colorectal cancer via various mechanisms (1–7). Moreover, the impact of vitamin D or its analogs on colon cancer cell proliferation, apoptosis, differentiation and cell cycle regulation is being investigated. The regulation of gene expression by vitamin D and its analogs progresses via binding to specific vitamin D receptors (VDR) upon ligand activation and dimerization with retinoid X receptors (RXR). Target genes possess specific nucleotide sequences: vitamin D response elements (VDREs) which bind VDR-RXR heterodimers to activate or suppress their expression (8–10). Post-transcriptional regulatory mechanisms of gene expression have also been proposed (11). The expression of VDR is low in normal colonic epithelial cells, but increases with malignant transformation and then decays with progressive tumor growth. This phenomenon is correlated with a decreasing level of VDR in the nucleus as compared with the cytoplasm. At the same time, high VDR expression correlates with an advantageous prognosis in colorectal patients, suggesting an important role for VDR in the pathogenesis of colon cancer (1,6,7,12).
Vitamin D deficiency in mice has been shown to result in the aggressive growth of mouse MC-26 colon cancer (13). Other experimental data have shown that dietary vitamin D significantly reduced the incidence of colonic tumors in rats or mice treated with the carcinogen (14,15). Moreover, deletion of the VDR gene in mice alters the balance between proliferation and apoptosis, increases oxidative DNA damage and enhances susceptibility to carcinogenesis (16).
Studies on combined treatment with 1,25(OH)2D3 or its analogs and different chemotherapeutic agents have been reported in vitro (17–22) and in vivo (23,24). Previously, we examined the biological activity against various cancer and normal cell lines of a series of side-chain modified and diastereomeric and geometric analogs of vitamin D (21,25,26). We also evaluated the influence of vitamin D analogs on the activity of a range of anticancer drugs in vitro and in vivo against the human and murine cancer cells (19–21,25–30). On the basis of these results, we selected two analogs for further studies: PRI-2191 (tacalcitol, 1,24-dihydroxyvitamin D3) and PRI-2205 (5,6-trans calcipotriol) (chemical structures are shown in Fig. 1). The selected analogs reveal higher antitumor and lower calcemic activity as well as lower toxicity than 1,25(OH)2D3 (26,28).
In the present study, we analyzed the effect of the vitamin D analogs PRI-2191 and PRI-2205 on the antitumor activity in vivo of 5-fluorouracil (5-FU) in mice bearing human (HT-29) colon cancer. The mechanism of action of the anti-metabolite agent 5-FU includes its ability to induce the level and activity of the tumor suppressor gene p53 and to stabilize p53 protein (31,32). Moreover, it has been shown that the target gene of p53 - p21waf1/cip1 is a primary 1,25(OH)2D3-responding gene with VDR binding promoter regions, in which p53 also co-localizes (10). In this connection, the 1,25(OH)2D3 can induce the expression of p21 independently on the activity of p53 protein, what consequently leads to the cell cycle arrest and inhibition of cell proliferation. This fact is important especially when the colon cancer cells exhibit mutated p53 protein, such as for example the HT-29 cell line used in our studies. Previous studies have shown that the human parathyroid calcium-sensing receptor (CaSR) is expressed in human colon epithelium and regulates epithelial proliferation and differentiation. Moreover, 1,25(OH)2D3 is involved in regulation of CaSR expression (33–35). Notably, 1,25(OH)2D3, as well as calcipotriol, promoted the sensitivity of human colon carcinoma cells to anticancer drugs, including 5-FU, which may be mediated through the CaSR (36,37). These data suggest that combined therapy with the use of vitamin D analogs and 5-FU may be promising.
Materials and methods
Compounds
1,25(OH)2D3 (calcitriol), PRI-2191, calcipotriol (PRI-2201) and PRI-2205 were obtained as certified synthetic materials from the Pharmaceutical Research Institute, Warsaw, Poland. Samples of the compounds were stored in amber ampoules, under argon at −20°C. Prior to usage, in the case of in vitro studies, compounds were dissolved in 99.8% ethanol to the concentration of 10−4 M and subsequently diluted in culture medium in order to reach the concentration of 100 nM. For animal experiments, compounds were dissolved in 99.8% ethanol, then diluted in 80% propylene glycol in order to reach the required concentrations and administered subcutaneously (s.c.) to mice in a volume of 5 μl/1 g of body weight.
5-FU (ICN Polfa, Rzeszów, Poland) solution at a concentration of 50 mg/ml was diluted in culture medium prior to usage in in vitro studies in order to reach the required concentrations and for in vivo experiments in saline in order to reach the required concentrations and then administered either intravenously (i.v.) or intraperitoneally (i.p.) to mice at a volume of 10 μl/1 g of body weight.
Capecitabine (CPC) (Pharmaceutical Research Institute, Warsaw, Poland) was dissolved in 40% ethanol, then diluted in water for injection in order to reach the required concentration and administered orally (p.o.) to mice at a volume of 10 μl/1 g of body weight.
Cells
The human colon cancer cell line HT-29 was obtained from the German Cancer Research Center (Deutsches Krebsforschungszentrum, DKFZ, Heidelberg, Germany) the origin of the cell line, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany. The cell line was cultured in vitro at the Cell Culture Collection of the Institute of Immunology and Experimental Therapy, Wroclaw, Poland.
Mice
The mice, female 6–8-week old NOD/SCID, Nu/J and NCr-nu/nu mice, weighing 20–25 g, were supplied by the University Children’s Hospital in Krakow (Poland) and the Medical University of Bialystok (Bialystok, Poland), Charles River Labs., National Cancer Institute, Frederic, USA respectively. Mice were maintained in specific pathogen-free (SPF) conditions. All animal experiments were performed according to EU Directive 2010/63/EU for animal experiments and were approved by the 1st Local Committee for Experiments with the Use of Laboratory Animals, Wroclaw, Poland.
Design of the in vivo experiments
Human colon cancer HT-29 cells were harvested with the use of 0.05% trypsin/0.02% EDTA, washed twice with serum-free minimum essential medium (α-MEM) and resuspended in Hank’s medium. A single-cell suspension (3.5×106/200 μl per mouse) with cell viability >90% was inoculated subcutaneously (s.c.). For orthotopic transplantation (i.i.), the anesthetized mouse was placed on a wooden board in the right lateral position and the incision was made through the left upper abdominal pararectal line and peritoneum. The cecal wall was carefully exposed, placed and fixed between layers of sterile gauze. A 1–2 mm piece of specimen, derived from a primary tumor grown s.c. in another mouse, was fixed to the serosal part of the cecal wall with 5-0 surgical sutures. After implantation, the peritoneum and abdominal wall were sutured with 4-0 surgical sutures (Dexon-‘S’; Polfa, Poznań, Poland). Tumor cell transplantations were performed under general anesthesia with a mixture of ketamine hydrochloride (100 mg/kg; Ketamina 10%; Biowet, Puławy, Poland) and xylazine hydrochloride (20 mg/kg; XylaRiem; Riemser Arzneimittel AG, Germany).
Details of the treatment schedules used
Determination of the dose and scheme of 1,25(OH)2D3 analog treatment
The treatment of NOD/SCID mice bearing subcutaneous HT-29 tumors was started either on day 12 (Fig. 4A left graph) or on day 5 (Fig. 4A right graph).
In the first experiment, 5-FU was administered intravenously (i.v.) at a dose of 75 mg/kg/day once a week for 4 weeks (on days 12, 19, 26, 33; total dose, 300 mg/kg). PRI-2191 or PRI-2205 were injected s.c. at doses of 0.2 μg/kg/day or 5.0 μg/kg/day, respectively, 5 times a week on days 12, 13, 14, 15, 16, 19, 20, 21, 22, 23, 26, 27, 28, 29, 30, 33, 34, 35 (total dose of PRI-2191, 3.6 μg/kg; PRI-2205, 90 μg/kg). This experiment was ended on day 36 and, after cell inoculation, the tumors were harvested for further analyses.
In the second experiment, 5-FU was administered intravenously (i.v.) at a dose of 75 mg/kg/day once a week, for 5 weeks (on days 5, 12, 19, 26, 33; total dose, 375 mg/kg). PRI-2191 or PRI-2205 were injected s.c. at doses of 1.0 μg/kg/day or 10.0 μg/kg/day, respectively, 3 times a week on days 7, 10, 12, 14, 17, 19, 21, 24, 26, 28, 31, 33, 35, 38, 40, 42, 45, 47 (total dose of PRI-2191, 18 μg/kg; PRI-2205, 180 μg/kg). This experiment was ended on day 49 and, after cell inoculation, the tumors were harvested for further analyses.
Treatment after orthotopic transplantation
The treatment of NCr-nu/nu mice bearing orthotopic HT-29 tumors was started either on day 17 (Fig. 5A left graph) or on day 11 (Fig. 5A right graph).
In the first experiment, 5-FU was administered i.v. at a dose of 75 mg/kg/day once a week, for 4 weeks (on days 17, 24, 31, 38; total dose, 300 mg/kg). PRI-2191 or PRI-2205 were injected s.c. at doses of 1 μg/kg/day or 10 μg/kg/day, respectively, 3 times a week on days 17, 19, 21, 24, 26, 28, 31, 33, 35, 38, 40, 42, 45, 47 (total dose of PRI-2191, 14 μg/kg; PRI-2205, 140 μg/kg). This experiment was ended on day 53 after cell inoculation. The blood was also collected and the calcium serum level was analyzed.
In the second experiment, mice were i.p. injected with 75 mg/kg/day 5-FU (on days 11, 18, 25, 32; total dose, 300 mg/kg) and/or vitamin D analog PRI-2205 at a dose of 10 μg/kg/day administered s.c. (3 times a week, on days 11, 13, 15, 18, 20, 22, 25, 27, 29, 32, 34, 36; total dose, 120 μg/kg). The experiment was ended on day 39 and, after cell inoculation, the tumors were harvested for further analyses. The blood was also collected and morphological analyses were performed.
PRI-2191 or PRI-2205 used in combined colon cancer treatment with oral 5-FU prodrug CPC
Nu/J mice were s.c. inoculated with human colon cancer HT-29 (data not shown). The treatment was started on day 5 after tumor cell inoculation. CPC was administered orally with the use of gastric tubes at a dose of 450 mg/kg/day 5 times a week (on days 5, 6, 7, 10, 11, 12, 13, 14, 17, 18, 19; total dose, 4.95 g/kg). Analogs PRI-2191 or PRI-2205 were administered s.c., 3 times a week, at doses of 1 mg/kg/day or 10 mg/kg/day, respectively (on days 5, 7, 10, 12, 14, 17, 19, 21, 24, 26, 28, 31, 33, 35, 38, 40, 42; total dose PRI-2191, 17 μg/kg; PRI-2205, 170 μg/kg). The experiment was terminated on day 46.
Evaluation of the therapeutic effect
Tumor diameters were measured three times a week by caliper. Tumor volume was calculated using the formula: (a2 × b)/2, where a, a shorter tumor diameter in mm and b, a longer tumor diameter in mm. Inhibition of tumor growth was calculated from the following formula: tumor growth inhibition (TGI) (%) (TGI) = 100 − [(WT/WC) × 100], where WT is the median tumor weight of treated mice and WC that of untreated control animals. The mice were also weighed three times a week.
Evaluation of combination effects
The minimal expected inhibition used to estimate the effect of the combination of two compounds was evaluated using the formula: TGI hypothetical values (HTGI) (%)= 100 − [(100 − E for cytostatic) × (100 − E for 1,25(OH)2D3 analog)/100] (38). Where E was TGI.
As a result of the comparison of TGI to % HTGI, the type of interactions between two compounds in combined treatment was designated and these could be: (i) synergy, when the experimental value of TGI is greater than HTGI; (ii) additive effect, when the two values are comparable; (iii) subadditive effect, if the experimental TGI value is smaller than the hypothetical, but larger than TGI for cytostatic given alone; (iv) antagonism, if the experimental TGI is smaller than the experimental TGI for cytostatic.
Blood leukocytes and calcium evaluation
The level of blood leukocytes and serum calcium was measured in each individual blood sample using the following devices: Sysmex K4500SL, serial number F2872, Japan and Olympus AU400, Olympus America, Melville, New York, USA, respectively.
Design of in vitro experiments for cell cycle distribution, cell death and p53 expression analysis
Cultured HT-29 cells were seeded at a density of 1×105 cells/ml of culture medium on 6-well plates (Corning, NY, USA) at a volume of 2 ml. On the following day, the cells were exposed to compounds for 48 h; vitamin D compounds 100 nM and 5-FU 100 or 200 μg/ml. Ethanol, used as a solvent for all compounds and diluted corresponding to its highest concentration, produced no toxicity.
Cell cycle analysis
Preparation of cells from in vitro culture
After 48 h of incubation, the cells were collected with the use of 0.05% trypsin/0.02% EDTA. The cell suspension was washed once in phosphate-buffered saline (PBS) supplemented with 2% of fetal bovine serum (2% PBS). Then, the cells were suspended in 2% PBS and counted in a hemacytometer.
Tissue preparation
HT-29 colon cancer cells from primary tumors were obtained by mincing fresh tumor tissue with a scalpel, passing them through a plasma filter and suspending them in PBS. After centrifugation, the cells were disaggregated with the use of 0.05% trypsin/0.02% EDTA. The cell suspension was washed once with PBS supplemented with 2% of fetal bovine serum (2% PBS). Then, the cells were suspended in 2% PBS and counted in a hemacytometer.
Cells (1×106) were fixed for 24 h in 70% ethanol at −20°C. Then, the cells were washed twice in PBS and incubated with RNAse (8 μg/ml, Fermentas, Germany) at 37°C for 1 h. The cells were stained for 30 min with propidium iodide (PI) (0.5 mg/ml; Sigma-Aldrich Chemie GmbH, Steinheim, Germany) at 4°C and the cellular DNA content was determined using a BD FACSCalibur instrument (Becton-Dickinson, San Jose, CA, USA.) and either ModFit LT 3.0 or WinMDI software.
Death cell analysis with PI staining (sub-G1 stage)
After 48 h of incubation, the cells were prepared in the same manner as cells for the cell cycle distribution assay described above. Data analysis was performed by flow cytometry using a BD LSRFortessa instrument (Becton-Dickinson). Next, data were analyzed in a BD FACSDiva 6.2 program. The experiment was repeated 4 times.
Apoptosis determination by Annexin V staining
After 48 h of incubation, the cells were collected using non-enzymatic cell dissociation solution (Sigma-Aldrich Chemie GmbH), washed in PBS supplemented with 1% of fetal bovine serum (1% FBS) and counted in a hemacytometer. The cells (2×105) were washed twice with PBS. Annexin V-FITC (Alexis Biochemicals, San Diego, CA, USA) was diluted to a concentration of 1 mg/ml in binding buffer [Hepes buffer: 10 mM HEPES/NaOH, pH 7.4, 150 mM NaCl, 5 mM KCl, 1 mM MgCl2, 1.8 mM CaCl2, (IIET, Wroclaw, Poland)] and the cells were suspended in 200 μl of this solution (freshly prepared each time). Then, after 15 min of incubation in the dark at room temperature, PI solution (0.1 mg/ml) was added prior to analysis to give a final concentration of 0.01 mg/ml. Data acquisition was performed by flow cytometry on a BD FACSCalibur instrument (Becton-Dickinson) using the CellQuest program. The data were displayed as a two-color dot plot with FITC-Annexin V (FL1-H, Y axis) vs. PI (FL3-H, X axis). Double-negative cells were live cells, PI+/Annexin V+ were late apoptotic or necrotic cells and PI−/Annexin V+ early apoptotic cells. Data were analyzed in the WinMDI 2.9 program. The experiment was repeated 3 times.
Mitochondrial membrane potential (Ψmt) determination
Mitochondrial injury was assessed by JC-1 (Sigma-Aldrich) staining. This dye, existing in the cytosol as a monomer, remained unprocessed due to a breakdown of Ψmt and fluoresces green. JC-1 can assume a dimeric configuration in the mitochondria and fluoresces red in a reaction driven by the mitochondrial transmembrane potential (39).
After 48 h of incubation, the cells were collected with the use of 0.05% trypsin/0.02% EDTA. The cell suspension was washed once with 2% PBS. Then, the cells were suspended in 2% PBS and counted in a hemacytometer. The HT-29 cells (5×105) were washed in 2% PBS. Pelleted cells were resuspended in 100 μl of warm cultured medium with the addition of 10 μl JC-1 (the final concentration of JC-1 was 3 μg/ml) and were then incubated for 15 min at 37°C. Next, the cells were washed with 1 ml of 2% PBS and were then resuspended in 300 μl of 2% PBS. Data acquisition was performed by flow cytometry on a BD FACSCalibur instrument (Becton-Dickinson) using the CellQuest program. Next, data were analyzed in WinMDI 2.8.
As a positive control of cells with low potential, we used cells which were incubated for 24 h with valinomycin (Sigma-Aldrich) at a concentration of 1 μM.
Active caspase 3 analysis
After 48 h of incubation, the cells were collected using non-enzymatic cell dissociation solution (Sigma-Aldrich Chemie GmbH), washed in PBS supplemented with 1% of fetal bovine serum (1% FBS) and counted in a hemacytometer. The cells (2×105 per sample) were washed once with 1% PBS and then suspended in 0.1 ml solution to fixing and permeabilization (BD Pharmingen, CA, USA) and incubated for 30 min at 4°C. After incubation, the cells were washed using buffer with added saponin (Perm/Wash Buffer; BD Pharmingen, CA, USA). Next, the cells were stained with anti-active caspase 3 conjugated with phycoerythrin (PE) (BD Pharmingen, CA, USA) for 50 min in the dark at room temperature. After incubation, the cells were washed using buffer with added saponin and then suspended in 0.3 ml in the same buffer. Data analysis was performed by flow cytometry using an LSRFortessa and FACSCalibur instruments (Becton-Dickinson, San Jose, CA, USA). Next, data were analyzed with the BD FACS Diva 6.2 program. The experiment was repeated 4 times.
p53 expression analysis
After 48 h of incubation, the cells were collected using non-enzymatic cell dissociation solution (Sigma-Aldrich Chemie GmbH), washed in PBS supplemented with 1% FBS and counted in a hemacytometer. The cells (2×105/sample) were washed once with 1% FBS and then suspended in 0.1 ml solution to fixing and permeabilization (BD Pharmingen, CA, USA) and incubated for 30 min at 4°C. After incubation, the cells were washed using buffer with added saponin (Perm/Wash Buffer; BD Pharmingen, CA, USA). Next, the cells were stained either with anti-p53-PE or with an IgG1,κ-PE isotype control (BD Pharmingen) for 50 min in the dark at room temperature. After incubation, the cells were washed using buffer with added saponin and then suspended in 0.3 ml in the same buffer. Data analysis was performed by flow cytometry using a BD LSRFortessa instrument (Becton-Dickinson). Next, data were analyzed with BD FACS Diva 6.2. The experiment was repeated 4 times.
Western blot analysis
Tissue preparation
Specimens of tumor tissue from euthanized animals were collected in liquid nitrogen and stored at −80°C. To determine protein expression via western blot analysis, frozen tumors were mechanically homogenized (Rotilabo, Carl Roth, Karlsruhe, Germany) in RIPA buffer (Sigma-Aldrich Chemie GmbH) supplemented with a complete mixture of phosphatase and protease inhibitors (Sigma-Aldrich Chemie GmbH) and then kept on ice for 45 min. Lysates were cleared via microcentrifugation at 17968 rcf × g for 20 min.
Preparation of cells from in vitro culture
Cultured HT-29 cells were seeded to a volume of 6 ml and at a density of 2×105 cells/ml of culture medium on a glass Petri dish. Next, after 24 h of incubation the cells were exposed to the test vitamin D compounds at the concentrations of 100 nM and/or 200 μg/ml 5-FU for 48 h.
Protein concentrations were determined using a protein assay (DC Protein Assay; Bio-Rad Laboratories, Hercules, CA, USA). Equal amounts of protein (25 or 50 μg for detecting VDR; 100 μg for p21, p27; ERK and p-ERK and 25, 50 or 100 μg for β-actin) were separated in a 10% (VDR, ERK1/2, p-ERK1/2, β-actin) or 15% (p21, p27) sodium dodecyl sulfate (SDS) polyacrylamide gel and transferred to either a polyvinylidene difluoride (PVDF) membrane (0.45 μm; GE Healthcare, Amersham, Little Chalfont, UK) or a nitrocellulose membrane (0.22 μm; NitroBind, GE Water and Process Technologies, Osmonics, Hopkins, MN, USA). Protein loading and transfer efficiency were monitored via 0.1% Ponceau S-Red staining. Membranes were blocked overnight (4°C) in 1% blocking reagent (membrane blocking agent; GE Healthcare, Amersham) in PBS. On the following day, the membrane was washed three times (×10 min) with 0.05% PBS/Tween-20 (PBST) and then incubated for 1 h at room temperature with a primary antibody: rabbit anti-VDR, anti-p21, anti-27, anti-ERK1/2 or anti-p-ERK1/2 polyclonal antibody (all from Santa Cruz Biotechnology Inc., Santa Cruz, CA, USA) or rabbit anti-β-actin (Sigma-Aldrich, Poznan, Poland). After incubation, the blot was washed three times with 0.1% PBST and incubated for 1 h with the secondary anti-rabbit immunoglobulins (GE Healthcare, Amersham). The membrane was finally washed three times with 0.1% PBST and incubated for 30 min with a fluorescent substrate for alkaline phosphatase-based detection (ECF; GE Healthcare, Amersham). Fluorescence was detected using a scanner (Typhoon scanner; GE Healthcare, UK). Densitometric analysis of the western blots was carried out using ImageJ 1.46r (National Institutes of Health, Bethesda, MA, USA).
Molecular modeling
Models of proteins were based on available structural data; vitamin D receptor in complex with vitamin D (PDB code: 1DB1), vitamin D-binding protein (DBP) in complex with 25-hydroxyvitamin D3 and oleic acid (PDB code: 1J7E) and the constitutive androstane receptor/retinoid X receptor (CAR/RXR) complex (PDB code: 1XV9). Structural data were processed with the Schroedinger LLC software suite Protein Preparation Wizard (40) and used for docking ligands prepared with ligand preparation in the GlideXP module (41–43) of the same software. Solvent molecules were removed from the complex unless within the 3.5 Å radius and participating in 3 or more hydrogen bonds. Estimates of binding energies were performed with Molecular Mechanics/Generalized Born Surface Area (MM/GBSA) method (VSGB 2.0 energy model) employing implicit solvation (44). The MMGSA model compares favorably with the more computationally intensive Poisson-Boltzmann method (45–47).
Statistical analysis
Statistical analysis was performed using STATISTICA version 7.1 (StatSoft, Inc., USA). The assumptions of ANOVA were checked using PP-plots, Shapiro-Wilk’s test and Levene’s test. In the case of violations of the ANOVA assumptions, a nonparametric stratified permutation Kruskal-Wallis overall test either with subsequent multiple comparisons or ANOVA followed by Tukey’s HSD for unequal N or Fisher’s test were used. P-values <0.05 were considered to indicate a statistically significant difference.
Results
Cell cycle and cell death of HT-29 colon cancer in vitro after incubation with PRI-2191 and PRI-2205 applied alone or in combination with 5-FU
The in vitro tests were performed after 48 h incubation of colon cancer cells with vitamin D analogs. 1,25(OH)2D3 and calcipotriol (PRI-2201) were used as reference compounds. In such experimental conditions, vitamin D compounds did not inhibit proliferation of HT-29 colon cancer cells; however, the tendency to improve the antiproliferative activity of 5-FU was observed (Table I). Cell cycle analysis in cultured HT-29 cells showed an increase in G0/G1 and a simultaneous decrease in S cell cycle stage by reference compounds or PRI-2191. PRI-2205 did not affect cell cycle distribution in the concentrations used (100 nM). 5-FU used alone at the dose of 200 μg/ml reduced the number of cells in G0/G1 and increased the number in the G2/M phase. Reference vitamin D compounds and PRI-2191 further decreased the cells in G0/G1 and increased those G2/M phase as compared to 5-FU used alone. Moreover, a significant decrease in cells in the S stage was observed. PRI-2205 acts differently from other vitamin D compounds; used in parallel with 5-FU, it increased the number of cells in G0/G1, S and decreased the number in G2/M as compared to 5-FU. Moreover, we observed a tendency for the number of cell deaths to increase when PRI-2205 was used together with 5-FU (Table I).
Table I.
Compounds | Proliferation inhibition (%) | Cell cycle distribution (% of cells) | |||
---|---|---|---|---|---|
| |||||
G0/G1 | S | G2/M | Sub-G1 | ||
Control | - | 49.9±4.9 | 38.6±4.2 | 11.5±1.7 | 0.4±0.5 |
EtOH | 1.5±1.5 | 49.2±4.9 | 37.6±5.8 | 13.2±1.3 | 0.7±0.3 |
1,25(OH)2D3 | 7.1±3.9 | 56.1±3.7 | 32.4±4.4 | 11.5±1.6 | 0.1±0.1 |
PRI-2191 | 1.6±3.0 | 59.0±1.4 | 30.4±1.1 | 10.6±0.7 | 0.1±0.2 |
Calcipotriol | 3.2±3.1 | 58.5±0.4 | 31.8±1.7 | 9.7±2.3 | 0.1±0.2 |
PRI-2205 | 4.6±1.8 | 51.2±4.6 | 36.7±4.6 | 12.2±2.2 | 0.9±0.8 |
5-FU | 49.9±4.6 | 41.5±7.4 | 33.2±8.7 | 25.3±15.2 | 0.1±0.2 |
5-FU+Calcitriol | 54.1±4.4 | 40.1±1.6 | 21.2±0.8 | 38.8±0.8 | 0.2±0.3 |
5-FU+PRI-2191 | 52.3±5.1 | 39.1±2.0 | 21.3±2.3a | 39.6±2.4 | 0.1±0.1 |
5-FU+PRI-2201 | 50.9±4.4 | 38.6±0.5 | 20.6±1.5a | 40.9±1.1 | 0 |
5-FU+PRI-2205 | 53.0±3.9 | 49.6±3.7 | 36.9±4.0 | 13.8±0.7 | 6.9±7.8 |
HT-29 colon cancer cells were incubated with vitamin D analogs (100 nM) and 5-FU (200 μg/ml) for 48 h. Cell cycle distribution-FACS analysis; the results are presented as a mean (± SD) percentage of the cell population attributed to one of the cell cycle phases: G0/G1, S, G2/M and sub-G1. Analysis was performed using ModFit LT 3.0 software.
P<0.05.
In further studies using the same experimental conditions, we analyzed some parameters of the cell death of HT-29 cells (Fig. 2). As shown in Fig. 2A, incubation with 5-FU caused significant HT-29 cell death when counted as positive PI staining. However, simultaneous treatment with vitamin D compounds led to a decrease in the percentage of cell deaths. This phenomenon was very profound when PRI-2191 was used with 5-FU. In apoptotic cells, the externalization of phosphatidylserine is observed from the cytoplasmic to the extracellular membrane site (39). Using Annexin V staining, we studied whether the tested compounds are able to induce apoptotic death and using PI staining, necrotic HT-29 cells were determined. The results are summarized in Fig. 2B. 5-FU, either used alone or in combination with all vitamin D compounds (with the exception of PRI-2191), showed the tendency to increase the number of early apoptotic cells (AV+), as well as to decrease the percentage of late apoptotic cells (AV+/PI+) (Fig. 2B). During apoptosis, the electrochemical gradient across the mitochondrial membrane breaks down (39). In our studies, the influence of the tested compounds on the Ψmt of HT-29 cells was analyzed. However, we did not observe any significant changes in Ψmt independent of the compounds used. Only analog PRI-2191 used with 5-FU caused a decrease in the number of cells with low Ψmt (Fig. 2C).
5-FU alone induced active caspase-3 expression. Analogs used alone had no effect on caspase-3 activity; however, in combination with 5-FU, such analogs reduced the induction of active caspase-3. 1,25(OH)2D3 diminished active caspase-3 expression to 50% as compared to 5-FU alone. Also, PRI-2191 and PRI-2201 diminished the expression of this enzyme. In contrast, PRI-2205 did not influence the induction of caspase-3 by 5-FU (Fig. 2D).
All vitamin D compounds showed the tendency to decrease p53 expression. Moreover, 1,25(OH)2D3, PRI-2191 and PRI-2201 decreased the level of p53 as compared to 5-FU alone (Fig. 2E).
A western blot analysis was also performed on the expression of cyclin-dependent kinase inhibitors (CDKI) p21 and p27 (Fig. 3A). The expression of p21 in HT-29 cells was 2.4- and 1.4-fold increased by PRI-2191 and PRI-2205, respectively. 5-FU used alone increased its expression 4.6-fold and a further increase of p21 expression was observed after cell incubation with 5-FU combined with vitamin D analogs. In the case of p27, only a slight induction of this protein expression was observed in cells incubated with either PRI-2191 or 5-FU alone or combined (Fig. 3A).
The level of phosphorylated ERK1/2 (p-ERK1/2) was diminished in cells treated either with 5-FU alone or combined with both PRI-2191 and PRI-2205. The diminution was more profound in cells incubated with 5-FU combined with both analogs (Fig. 3B).
Effect of PRI-2191 or PRI-2205 administered alone or in combination with 5-FU on subcutaneous human colon cancer HT-29
Primary tumor growth
Independent of the treatment schedule, mice treated with PRI-2191 or PRI-2205 developed similar tumors to those in control mice. They also did not affect the body weight of the animals treated (max. 8% decrease). 5-FU decreased tumor volume, but not in a significant manner; TGI was in the range of 15–50%. 5-FU used alone decreased the body weight by ~5% (data not shown).
In combined treatment using the first protocol (analogs administered 5 times a week), analog PRI-2205 did not influence tumor growth. From day 28 of the experiment, analog PRI-2191 showed a tendency to reduce tumor volume in combination with 5-FU and its interaction could be explained as synergism (Fig. 4A, left graph).
The second treatment schedule was considerably more effective. Both agents potentiate the antitumor activity of 5-FU. A statistically significant retardation of tumor growth was observed in mice treated with 5-FU and PRI-2191 from day 28 to the end of the experiment (with the exception of days 40 and 47). PRI-2205 used with 5-FU significantly retarded tumor growth from day 24 to the end of measurements. Synergy was observed on all measurement days (Fig. 4A, right graph).
Cell cycle analysis (analogs administered 5 times a week)
Cell cycle analysis was performed on tumors harvested from mice treated both with 5-FU alone and combined with both analogs. It was observed that, in tumors treated with 5-FU, the percentage of cells in the G0/G1 stage significantly decreased. Moreover, these cells were stopped in the S phase (P<0.05) and the percentage of cell deaths increased. PRI-2191 used alone did not significantly affect the cell cycle of HT-29 tumors. However, used in combined treatment with 5-FU, it increased the number of cells in G0/G1 and in parallel decreased the cells in both the G2/M and S stages as well as death cells as compared to 5-FU alone (Fig. 4C). Tumors from mice treated with PRI-2205 combined with 5-FU showed a similar cell cycle distribution to that of mice treated with 5-FU alone (Fig. 4C).
Western blot analysis of selected groups of mice (analogs administered 5 times a week)
For this analysis tumors from mice treated with 5-FU alone or combined with vitamin D analogs were harvested. The results of the western blot studies showed that, in tumors from mice treated with 5-FU combined with PRI-2191 or PRI-2205, the expression of p27 and VDR was increased as compared to tumors from animals treated with 5-FU alone. The expression of p21, as well as p-ERK1/2 was diminished when mice were administered with 5-FU combined with both analogs. This diminution was well-defined for PRI-2205 (Fig. 4B).
Effect of PRI-2191 or PRI-2205 administered alone or in combination with 5-FU on mice bearing orthotopic human colon cancer HT-29
Primary tumor growth
In these experiments, we used the optimal treatment schedule to assess the antitumor activity of combined treatment against tumors growing intra-intestinally.
Analyzing the weight of intestinal tumors harvested from mice, we observed a statistically significant reduction in tumor growth in mice treated with 5-FU and both analogs (Fig. 5A). In the left-hand graph, the results of experiments with an i.v. route of injection of 5-FU are shown. 5-FU alone reduced tumor weight by 37% as compared to the control, whereas used with PRI-2191 or PRI-2205 the reduction was 66 and 68%, respectively (Table II) and this effect was synergistic. Similar results were observed after i.p. administration of 5-FU with PRI-2205 (Fig. 5A, right graph). The schedules of treatment used did not affect the body weight of animals (data not shown). Moreover, when the serum calcium level was analyzed, we did not observe any significant changes (Table II). The blood leukocyte count had decreased by 5-FU and a further decrease was observed in combined treatment with PRI-2205 (Table II). This analysis was not performed for PRI-2191.
Table II.
5-FU intraperitoneally | 5-FU intravenously | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
|
|
|||||||||
Group | Tumor weight on day 39 (g) | TGI (%) | H (%) | Leukocytes (thousands/μl) | N | Tumor weight on day 53 (g) | TGI (%) | H (%) | Calcium (mmol/l) | N |
Control | 0.305±0.140 | 5.5±1.3 | 6 | 0.808±0.24 | -- | 2.50±0.07 | 6 | |||
PRI-2191 | nt. | nt. | nt. | 0.657±0.20 | 20 | 2.61±0.07 | 5 | |||
PRI-2205 | 0.291±0.199 | 5 | 5.7±0.6 | 7 | 0.663±0.38 | 35 | 2.42±0.08 | 5 | ||
5-FU | 0.138±0.072 | 55 | 4.2±1.3 | 6 | 0.527±0.33 | 37 | 2.48±0.03 | 7 | ||
5-FU + PRI-2191 | nt. | nt. | nt. | 0.268±0.09a | 66 | 49 | 2.55±0.04 | |||
5-FU + PRI-2205 | 0.097±0.062a | 68 | 57 | 3.5±1.0 | 7 | 0.259±0.08a | 68 | 59 | 2.49±0.02 | 6 |
(%) H, the expected inhibition used to estimate the effect of the combination of two compounds was evaluated using the formula (%) H = 100 − [(100 − E for cytostatic) × (100 − E for calcitriol analog)/100], where E was tumor growth inhibition (TGI). N, no. of mice/group; nt., not tested.
P<0.05 as compared to control and PRI-2205, ANOVA followed by Tukey HSD test for unequal N.
Cell cycle analysis and VDR expression (i.p. administration of 5-FU)
Analyzing cell cycle and cell death in cells derived from HT-29 intestinal tumors, we showed a significant decrease in the percentage of cells in the G2M phase and a tendency to increase the number of cell deaths in tumors from mice treated with 5-FU and PRI-2205 simultaneously (Fig. 5B). The expression of VDR increased in treated groups as compared to tumors from control mice. A 5 fold-increase in VDR expression as compared to control tumors was observed in tumors from mice treated with both agents and with PRI-2205 alone (Fig. 5C). We observed a similar tendency in HT-29 cells from in vitro culture (Fig. 5C).
Effect of PRI-2191 or PRI-2205 administered either alone or in combination with CPC on mice bearing subcutaneous human colon cancer HT-29
CPC, in the doses and schedules used, did not influence tumor growth until day 38 of the experiment, when some retardation was observed. In this model, neither vitamin D analog improved the anticancer activity of CPC (data not shown).
Molecular modeling
The vitamin D compounds 1,25(OH)2D3, PRI-2191, PRI-2205 and calcipotriol were docked into the space occupied by the original ligand [1,25(OH)2D3; 25(OH)D3; 3,20-pregnanedione for VDR, DBP and CAR, respectively] and the binding energy was estimated using an implicit solvation model. The results presented in Fig. 6A show that the estimated binding energy to VDR calculated for PRI-2205 is similar to its parent compound, namely calcipotriol, and is higher than that observed for PRI-2191 and 1,25(OH)2D3. On the other hand, analyzing binding energy to DBP (Fig. 6B), we conclude that both analogs tested, PRI-2191 and PRI-2205, have higher affinity to DBP than the parent compounds, 1,25(OH)2D3 and calcipotriol.
1,25(OH)2D3 did not interact with the ligand binding domain of CAR/RXR protein complex. However, PRI-2205 possesses a reasonable affinity to this receptor which was higher than for tacalcitol (Fig. 6C). The affinity of PRI-2201 was the highest from the three mentioned compounds.
Discussion
1,25(OH)2D3 (calcitriol) and its analogs are known to be agents which exert anticancer activities both alone and by cooperating with anticancer compounds (17,48). In our previous experiments with mouse colon cancer MC38 in vivo, we showed that 1,25(OH)2D3 analogs interact synergistically with 5-FU improving its antitumor and antimetastatic activity, as well as prolonging the survival time of mice. However, better results were observed for PRI-2191 than for PRI-2205 (49). In the present study, we analyzed the antitumor effect of such combined treatment on immunodeficient mice bearing human HT-29 colon cancer. We showed that the three times a week schedule of treatment is more effective than the other schedule. However, analog PRI-2191 in combined treatment with 5-FU retarded subcutaneous tumor growth in both schedules (three and five times a week of administration of vitamin D analogs). The improved antitumor effect of 5-FU by PRI-2191 or PRI-2205 was also observed in mice bearing human colon cancer HT-29 transplanted orthotopically.
It has been previously shown that proliferating HT-29 colon cancer cells exhibit upregulation of VDR and induction of 24-hydroxylase mRNA, whereas differentiated cells fail to exhibit either of these biological responses to 1,25(OH)2D3 (50). Moreover, differentiation of colon cancer cells induced by various treatments occurs via upregulation of VDR (50,51). Palmer et al reported that vitamin D analogs promote differentiation only of colon cancer cells expressing VDR and that this process is related to induction of E-cadherin and inhibition of β-catenin signaling (52). The analysis of VDR expression in orthotopic or subcutaneous tumors from mice treated with 5-FU and PRI-2205 showed either a 2.3- or only a 1.2-fold increase as compared to 5-FU, respectively. In subcutaneous tumors, PRI-2191 also slightly increased (1.4-fold) expression of VDR as compared to 5-FU alone. In our previous studies, we observed a 6-fold increase in VDR expression in subcutaneous HT-29 tumors by PRI-2191 used alone, but not by PRI-2205 (30). The differences between the significant increase (5.5-fold) in VDR in orthotopic tumors and that observed subcutaneously (0.8-fold) by PRI-2205 (30) could be explained via the importance of the tumor microenvironment in which cancer cells are implanted (53,54). HT-29 cells incubated with these agents in in vitro culture showed a similar pattern of VDR expression to that of orthotopic tumors (Fig. 5C).
The ligand binding domain (LBD) of the VDR protein has been well characterized using the known amino acid sequence of the VDR and its crystallized structure. An evaluation of how 1,25(OH)2D3 is oriented within the LBD has provided important insight into the chemical interactions that are responsible for ligand-receptor binding. These interactions have been essential for the elucidation of the structure function relationship between the VDR, 1,25(OH)2D3 and the development of new 1,25(OH)2D3 analogs (55,56). It is known that PRI-2191 [tacalcitol, 1,24-(OH)2D3] has a similar or higher affinity for the VDR than the parent compound 1,25(OH)2D3 (57). On the other hand, the relative affinities to the VDR of some analogs with high anticancer activity, such as KH1060, calcipotriol (MC-903) and EB 1089, were similar or lower compared to 1,25(OH)2D3 (55). The estimated energy of binding PRI-2205 to LBD of VDR as calculated in our studies was higher than that for PRI-2191; moreover, both analogs bind to ligand binding pocket of vitamin D binding protein (DBP) with similar affinity. The biological activity of vitamin D metabolites and analogs depends on their affinity not only for the VDR but also for vitamin D binding protein. One of the functions of DBP is to prolong the lifetime of 1,25(OH)2D3 in circulation. Analogs with a low DBP but good receptor binding properties display low in vivo biologic activity on calcium and bone homeostasis, at least partly due to the altered pharmacokinetics (58). However, the biological activity in vivo of secosteroids could also be modulated through its potential interaction with constitutive androstane receptor (CAR) and a crosstalk CAR-VDR. Constitutive androstane receptor was originally identified as a xenobiotic sensor that regulates the expression of cytochrome P450 genes. However, previous studies suggest that this nuclear receptor is also involved in the regulation of energy metabolism including glucose and lipid homeostasis (59,60). One of the VDR target genes is CYP24 which encodes a mitochondrial cytochrome P450 that hydroxylates 1,25(OH)2D3 and other vitamin D derivatives at position 24. This biotransformation converts these molecules to inactive metabolites. Transactivation of two responsive elements (VDRE-1 and VDRE-2) in CYP24 by VDR/RXR leads to increased expression of CYP24, reduced level of the biologically active 1,25(OH)2D3 and downregulation of VDR-target genes (61). Notably, Moreou et al (62) showed that CAR binds to and transactivates the VDREs present in the CYP24 promoter and that a specific human CAR agonist, CITCO, increases CYP24 mRNA expression in primary human hepatocytes. These findings suggest that the VDR-CAR crosstalk resulting from the recognition of same response elements is reciprocal (62). Such crosstalk provides, at least in part, an objective explanation to the observation from our studies indicating similar biological activity of PRI-2191 and PRI-2205, but lower toxicity of the latter (26). As we showed, PRI-2205 has stronger affinity for CAR/RXR complex than PRI-2191 and in parallel possesses higher binding affinity for VDR LBD. This characteristic of PRI-2205 may be the possible explanation of its low toxicity via increased generation of CYP24 through VDR and CAR activation, with a sustained, but lower, anticancer activity through the requirement for higher doses needed to obtain results similar to PRI-2191. The last conclusion is also supported by our docking studies showing a high affinity to VDR as well as the best binding to DBP.
Cell cycle distribution in cells from in vitro culture as well as from tumors was not influenced by PRI-2205 used alone. However, we observed a similar general tendency in all experimental conditions towards a decrease in the number of cells in G0/G1, G2M and S as compared to 5-FU alone. Moreover, in orthotopic tumors as well as in cultured cells, an increase in cell deaths was observed in combined treatment regimens. PRI-2191 acted differently, increasing the percentage of cells in G0/G1 and decreasing it in S and G2/M as compared to 5-FU alone. This suggests the pro-differentiating activity of this analog, particularly when we take into consideration our previous results showing that PRI-2191 increased the expression of E-cadherin on HT-29 cells in vitro (49). There, it was shown that the target gene of p53 - p21waf1/cip1 is a primary 1,25(OH)2D3-responding gene with VDR binding promoter regions (10). Moreover, other vitamin D targeted genes which lack VDRE, such as the other cell cycle inhibitor p27, could be regulated by 1,25(OH)2D3 (63,64). Several studies suggest that growth inhibition by 1,25(OH)2D3 may be attributed to inhibition of the G1 to S cell cycle transition, which may be due, at least in part, to stimulation of the expression of the cyclin-dependent kinase inhibitors (CDKIs), p21 and p27, as well as to programmed cell death (10). Our present observations are in accordance with previous results on the pro-differentiating activity of PRI-2191. We have shown that HL-60 leukemia cells acquire a mature macrophage phenotype after their exposure to PRI-2191 in vitro (21). Moreover, we also observed that PRI-2191 increased the expression of p27 in mouse mammary gland tumors (29). These data suggest that the higher antitumor effect of the combined treatment with PRI-2191 and 5-FU may be the result of the cell cycle arrest in the G0/G1 cell cycle phase and the increased p21 and p27 expression following treatment with PRI-2191. However, the lack of increase in the p27 expression following treatment with PRI-2205 suggests that there may be differences between the mechanisms of action of these two analogs.
1,25(OH)2D3 or its analogs could reveal various activities, balanced between pro- and anti-apoptotic pathways. In particular, 1,25(OH)2D3 increased the level of pro-apoptotic protein BAK (BCL-2 family member) (65) and decreased the anti-apoptotic activity of β-catenin (52). Analysis of the cell death parameters in in vitro culture suggested antagonism in pro-apoptotic activity, especially of PRI-2191 and 5-FU. The percentage of PI stained cells, active caspase-3 as well as p53 positive cells decreased in comparison to 5-FU. PRI-2191 also reduced the number of both cells with lower mitochondrial potential and Annexin V positive cells. A similar effect was described after simultaneous incubation of HT-29 cells with H2O2 and 1,25(OH)2D3. The increased cytotoxic effect of simultaneous treatment was demonstrated, but the activity of caspase 3 was decreased by 1,25(OH)2D3 as compared to H2O2 (66). PRI-2205 slightly decreased only PI positive cells, but did not affect caspase-3 or p-53 positive cells as compared to 5-FU alone. HT-29 possessed mutated p53 (67) and, according to recent studies, a functional and physical interaction between mutated p53 and the vitamin D transcriptional regulatory pathway exists. This interaction lies in the cooperation between mutated p53 with 1,25(OH)2D3 to elicit an anti-apoptotic state (68). Since PRI-2191 possesses a similar pattern of activity to 1,25(OH)2D3, the presence of mutated p53 in HT-29 cells may be the reason of the observed anti-apoptotic effects. However, in spite of these disadvantageous effects regarding apoptosis, the therapeutic effect expressed as tumor growth retardation is significant. In contrast, PRI-2205, several activities of which differ from those observed for 1,25(OH)2D3 or PRI-2191 (such as no influence on the expression of p53), did not reveal anti-apoptotic activity. Moreover, our previous studies, including on HL-60 leukemia cell lines, showed the pro-apoptotic activity of this analog (26).
5-FU is an important drug used in the chemotherapy of colorectal cancer, but new strategies for combined treatment with this agent are still under development. It has been assumed that the low thymidylate synthase (TS; a direct target of 5-FU) level increases drug efficacy (69). Previous data as well as our own results showed that HT-29 cells (with mutated TP53) exposed to 5-FU are cumulated in S cell cycle phase which is correlated with high TS level during DNA synthesis (70). High level of TS leads to insensitivity of tumor cells to 5-FU and is one of the main reasons of resistance development (71). Takagi et al (72) showed that the HCT116 colon cancer cells with silenced expression of p21 protein express higher level of TS than wild-type cells. Both analogs induced the expression CDKIs p21 and/or p27 and could probably block the expression of TS and therefore increase the 5-FU activity. Some agents are known as sensitizing cells to 5-FU via various mechanisms. An example is trametinib, which induced p15 and p27 expression and reduced cyclin D1 levels. Another one is fenofibrate which dephosphorylated ERK1/2 and reduced cyclin D1 levels in HT-29 cells with subsequent G1-phase arrest, reduced TS expression and sensitized cells to 5-FU (73). PRI-2191 and PRI-2205 possess a similar profile of activity, also reducing the level of p-ERK1/2 as compared to 5-FU alone.
In conclusion, our results suggest that the mechanism of potentiation of 5-FU antitumor action by both analogs is realized via increased p21 expression and decreased phosphorylation level of ERK1/2 which may lead to diminution of thymidylate synthase expression. However, the differences in the biological activity including mode of action and toxicity between both analogs was observed. Our molecular modeling studies may in part clarify some of these differences, namely, in general PRI-2205 possesses higher binding affinity for VDR, DBP, but also for CAR\RXR ligand binding domain which may, in part, explain its very low toxicity with sustained anticancer activity. However, the combined treatment proposed in our studies was ineffective in the HT-29 colon cancer model, when capecitabine was used in place of 5-FU.
Acknowledgements
The research was supported by the Polish Ministry of Science and Higher Education Grant No. N N401 014535 and by Polish National Science Center Grant No. 2012/05/N/NZ5/00883. W.S. is funded by an internal grant from Wroclaw Research Center EIT+ Sp. z o.o. No. 3.6 ‘Development of inhibitors of pathogenic E. coli’ and an extension to the same grant ‘Development of efflux pump inhibitors for chemotherapy’.
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