Table 1.
Mcm1p ChIP-chip fold enrichments of the top Ahr1p binding sites.
| Gene namea | Ahr1p fold enrichment | Mcm1p(WT) fold enrichment | Mcm1p(ahr1) fold enrichmentb |
|---|---|---|---|
| CTA4 | 20.67 | 12.67 | – |
| RME1c | 15.73 | 7.95 | – |
| orf19.699 | 14.96 | 9.47 | – |
| CAM1 | 13.03 | 7.37 | – |
| SPO11/RCR1 | 12.53 | 11.17 | – |
| orf19.7152 | 11.19 | 6.99 | – |
| EFG1c | 10.55 | 10.73 | – |
| COG2/RFG1c | 10.48 | 11.33 | – |
| CDC8/SVL3 | 10.41 | 5.92 | – |
| AHR1/orf19.7380c | 10.36 | 7.95 | – |
| N/A | 10.09 | 7.24 | – |
| CTN2 | 9.91 | 3.76 | – |
| N/A | 9.90 | 6.47 | – |
| MDR1d | 9.52 | 12.88 | 6.99 |
| N/A | 9.46 | 7.10 | – |
| AHR1 | 9.15 | 10.55 | 2.04 |
| GIT2 | 9.14 | 5.94 | – |
| ALS1 | 9.07 | 7.06 | – |
| orf19.6805c | 9.00 | 6.69 | – |
| ENA21 | 8.87 | 7.87 | – |
| TEC1c | 8.67 | 9.03 | – |
| GCN4 | 8.48 | 3.88 | – |
| orf19.2332/orf19.2333 | 7.98 | 5.62 | – |
| N/A | 7.87 | 7.12 | – |
| orf19.7306 | 7.61 | 9.35 | 2.24 |
| EMC9/orf19.1906 | 7.60 | 5.25 | – |
| CSR1 | 7.45 | 6.85 | – |
| orf19.251d | 7.04 | 8.06 | 5.66 |
| orf19.6996 | 7.03 | 6.48 | – |
| orf19.4459 | 6.98 | 6.67 | – |
| FCR1 | 6.95 | 5.46 | – |
| NTA1/orf19.851 | 6.86 | 5.50 | – |
| GAP4 | 6.75 | 4.30 | – |
| APN2/orf19.1835 | 6.73 | 4.94 | – |
| orf19.4531d | 6.70 | 8.90 | 8.45 |
| orf19.450c | 6.66 | 6.95 | – |
| SFK1c | 6.40 | 6.52 | – |
| PHM7/orf19.2169 | 6.37 | 10.38 | – |
| AAF1c | 6.35 | 5.44 | – |
| PHO2c | 6.16 | 4.73 | – |
| N/A | 6.16 | 4.08 | – |
| orf19.2724 | 6.15 | 3.60 | 3.58 |
| N/A | 6.12 | 5.19 | – |
| RPC31 | 6.08 | 4.93 | – |
| CRZ2c | 6.00 | 5.36 | – |
| PYR2 | 5.91 | 2.84 | – |
| SFK1c | 5.78 | 5.70 | 3.02 |
| FAA4c | 5.73 | 5.92 | 3.64 |
| SOD5/orf19.2059 | 5.59 | 3.18 | – |
| GPX2 | 5.40 | 4.23 | – |
a
Peaks at the 3′ ends of adjacent genes could not be associated with a gene and are called N/A.
b
Fold enrichments < 2 are indicated with ‘–’.
c
Binding site is > 2 kb upstream of the gene’s start codon.
d
Mcm1p canonical motif at binding site among Mcm1p(ahr1) targets with a fold enrichment > 2.