Skip to main content
. 2014 Jul 10;9(7):e101685. doi: 10.1371/journal.pone.0101685

Table 2. Association analysis of genetic variants in DNA repair genes with the risk of major NHL subtypes.

DLBCL FL SLL/CLL
(412 Cases/1,946 Controls) (301 Cases/1,946 Controls) (164 Cases/1,946 Controls)
Gene Chr. SNP Minor Allele Allele Freq. OR (95% CI) P OR (95% CI) P OR (95% CI) P Breslow-Day P
ATM 11 rs611646 T 0.45 1.37 (1.14–1.64) 7.7×10−4 1.19 (0.96–1.46) 0.108 1.41 (1.06–1.87) 0.017 0.132
ATM 11 rs227060 T 0.37 1.34 (1.13–1.58) 8.7×10−4 1.10 (0.91–1.34) 0.334 1.58 (1.21–2.06) 6.7×10−4 0.037
ATM 11 rs419716 T 0.42 0.75 (0.62–0.90) 0.0026 0.84 (0.68–1.04) 0.107 0.84 (0.63–1.11) 0.217 0.229
MRE11A 11 rs10831227 A 0.34 0.77 (0.65–0.93) 0.0050 0.91 (0.75–1.11) 0.361 0.97 (0.74–1.26) 0.803 0.479
ATR 3 rs10804682 A 0.20 1.27 (1.05–1.55) 0.016 1.09 (0.86–1.37) 0.480 1.17 (0.87–1.59) 0.296 0.152
POLQ 3 rs702019 G 0.23 0.79 (0.64–0.97) 0.025 0.81 (0.64–1.03) 0.082 0.98 (0.71–1.34) 0.876 0.362
NBS1 8 rs14448 C 0.06 1.39 (1.01–1.93) 0.047 1.11 (0.74–1.65) 0.625 0.87 (0.48–1.58) 0.654 0.320
MSH2 2 rs4952887 T 0.07 0.72 (0.52–1.00) 0.048 0.71 (0.49–1.03) 0.073 0.63 (0.38–1.06) 0.079 0.432
CCNH 5 rs3093819 T 0.46 1.15 (0.98–1.37) 0.095 1.29 (1.06–1.57) 0.012 1.14 (0.87–1.49) 0.341 0.773
MRE11A 11 rs625245 C 0.32 0.85 (0.71–1.03) 0.106 0.78 (0.63–0.97) 0.028 0.87 (0.65–1.16) 0.347 0.810
GTF2H1 11 rs4150606 A 0.50 0.88 (0.74–1.05) 0.144 0.84 (0.69–1.02) 0.083 0.52 (0.39–0.69) 4.8×10−6 0.001
CHEK1 11 rs565416 A 0.32 0.97 (0.82–1.16) 0.749 0.71 (0.58–0.87) 0.0012 0.99 (0.76–1.28) 0.915 0.006
TDP1 14 rs7149962 C 0.06 1.06 (0.73–1.52) 0.773 1.64 (1.14–2.35) 0.0076 0.91 (0.52–1.60) 0.754 0.921
NBS1 8 rs1805812 C 0.06 0.68 (0.45–1.04) 0.073 0.72 (0.46–1.15) 0.168 1.05 (0.58–1.88) 0.877 0.831
MSH6 2 rs7562048 G 0.44 0.87 (0.73–1.05) 0.146 0.87 (0.71–1.06) 0.162 0.84 (0.64–1.09) 0.188 0.150

DLBCL = diffuse large B-cell lymphoma; FL = follicular lymphoma; SLL/CLL = small lymphocytic lymphoma/chronic lymphocytic leukemia; OR = odds ratio; CI = confidence interval.